DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT3G15430

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001325716.1 Gene:AT3G15430 / 820782 AraportID:AT3G15430 Length:488 Species:Arabidopsis thaliana


Alignment Length:472 Identity:108/472 - (22%)
Similarity:188/472 - (39%) Gaps:91/472 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LIPHDDLDPPSKLPEDLLATLEKTPGQMLIAGMVTWDLTGK------------------RDRKNV 98
            ||..:||  ||.|..::|     |.|::....:::.:||.|                  .....:
plant     7 LISFEDL--PSHLILEVL-----TSGRLSAVDLLSLELTSKVFGGSHGFYPLKFRSLADYAASQL 64

  Fly    99 TKVRP----------------------NLYSFHRFTEEKYRYVASGPSAA-------HTILINMD 134
            ..:.|                      .|:||.:..|:....|.:.....       ||:||| :
plant    65 CSMHPVYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLIN-N 128

  Fly   135 RKALGFGRNPSGQLGLSQDIK--LAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENK 197
            .|....|.:.||.|....:..  :|..|...|...|  :.|.:..::|:.|:..:|.|..||:|.
plant   129 SKVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQ--VAQVSATQNHSAFVLQSGQVLTCGDNS 191

  Fly   198 SGQCGVGNTHANIYSPTPIN-YRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKY 261
            |..||..:|...|:.|..:. .:|.|..::..|..|:|.|..:|..:|.|...:|||||.     
plant   192 SHCCGHLDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHG----- 251

  Fly   262 FVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGF 326
                       :|..:.|...:|..|.  :.||     |..|.|.::.:|:.....|||:|.|..
plant   252 -----------DTLDRPVPKVVEFLKT--IGPV-----VQIAAGPSYVLAVTQDGSVYSFGSGSN 298

  Fly   327 GRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQN----KKTGEAN-- 385
            ..|||.|.:||:.||:::.|..:|.....|..|...::.::..|.::.:|:.    ...|:.|  
plant   299 FCLGHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDK 363

  Fly   386 MYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTV--PKEVPKLD 448
            :.|:.:.:|:......:........:..:..|:.......||.||..:...|..|  |:.:..|.
plant   364 ITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLK 428

  Fly   449 NIKIPQVTMGYSHTVLL 465
            ..::.||:.|..||:::
plant   429 PHRVSQVSTGLYHTIVV 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 10/46 (22%)
RCC1_2 171..200 CDD:290274 9/28 (32%)
RCC1 188..236 CDD:278826 16/48 (33%)
RCC1 239..312 CDD:278826 17/72 (24%)
RCC1 317..366 CDD:278826 17/48 (35%)
RCC1 414..465 CDD:278826 14/52 (27%)
AT3G15430NP_001325716.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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