DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and RCC1L

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_110425.2 Gene:RCC1L / 81554 HGNCID:14948 Length:464 Species:Homo sapiens


Alignment Length:368 Identity:96/368 - (26%)
Similarity:151/368 - (41%) Gaps:103/368 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NVTKV------RPNLYSFHRFTEEK---YRYVASGPS--------------------AAHTILIN 132
            :||||      :.:...|||..::|   |.||.. ||                    .||::::.
Human   127 DVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLE-PSPVSLPLDRPQETRVLQVSCGRAHSLVLT 190

  Fly   133 MDRKALGFGRNPSGQLGLSQDIKLAEKPTI-----IPALEQLN--IVQAAVGRHHTLFLTDTGTV 190
            ........|.|..||.|.    |:.|....     :..::..:  :||.|.|:.|:|||||.|.|
Human   191 DREGVFSMGNNSYGQCGR----KVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEV 251

  Fly   191 YACGENKSGQCGVGNTHANI-YSPTPI--NYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQ 252
            |:||....||.|:|  |.|| .|||.:  :..|..:|::....:..:.:...|.|..:|..||.|
Human   252 YSCGWGADGQTGLG--HYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQ 314

  Fly   253 LGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFACGNNHTVAIDSKK 316
            |...||:.. ||..: ..||                      .|| ::...|||......::.:.
Human   315 LASVTDSTQ-VNVPR-CLHF----------------------SGVGKVRQAACGGTGCAVLNGEG 355

  Fly   317 RVYSWGFGGFGR----LGHAEPKDEMVPRL---MKFFDTQGRGGRSVFCG-STFSLIVNELGLLF 373
            .|:.||:|..|:    :..|.|  ||:|..   :..|:.:.:..| :.|| |.|:.:.|: |.||
Human   356 HVFVWGYGILGKGPNLVESAVP--EMIPPTLFGLTEFNPEIQVSR-IRCGLSHFAALTNK-GELF 416

  Fly   374 LFGQNKK----TG--EANMYPKPVQDLSGWNIT------DIGC 404
            ::|:|.:    .|  |...:|        |.:|      |:.|
Human   417 VWGKNIRGCLGIGRLEDQYFP--------WRVTMPGEPVDVAC 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 86/337 (26%)
RCC1LNP_110425.2 ATS1 <55..274 CDD:444065 45/153 (29%)
RCC1 1. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 58..124
RCC1 2. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 128..191 15/63 (24%)
ATS1 178..>455 CDD:444065 83/316 (26%)
RCC1 3. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 193..247 15/57 (26%)
RCC1 4. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 248..300 17/53 (32%)
RCC1 5. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 302..353 18/74 (24%)
RCC1 6. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 354..411 16/59 (27%)
RCC1 7. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 412..461 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.

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