DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and RCC1L

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_110425.2 Gene:RCC1L / 81554 HGNCID:14948 Length:464 Species:Homo sapiens


Alignment Length:368 Identity:96/368 - (26%)
Similarity:151/368 - (41%) Gaps:103/368 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NVTKV------RPNLYSFHRFTEEK---YRYVASGPS--------------------AAHTILIN 132
            :||||      :.:...|||..::|   |.||.. ||                    .||::::.
Human   127 DVTKVWGMGLNKDSQLGFHRSRKDKTRGYEYVLE-PSPVSLPLDRPQETRVLQVSCGRAHSLVLT 190

  Fly   133 MDRKALGFGRNPSGQLGLSQDIKLAEKPTI-----IPALEQLN--IVQAAVGRHHTLFLTDTGTV 190
            ........|.|..||.|.    |:.|....     :..::..:  :||.|.|:.|:|||||.|.|
Human   191 DREGVFSMGNNSYGQCGR----KVVENEIYSESHRVHRMQDFDGQVVQVACGQDHSLFLTDKGEV 251

  Fly   191 YACGENKSGQCGVGNTHANI-YSPTPI--NYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQ 252
            |:||....||.|:|  |.|| .|||.:  :..|..:|::....:..:.:...|.|..:|..||.|
Human   252 YSCGWGADGQTGLG--HYNITSSPTKLGGDLAGVNVIQVATYGDCCLAVSADGGLFGWGNSEYLQ 314

  Fly   253 LGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGV-QIVDFACGNNHTVAIDSKK 316
            |...||:.. ||..: ..||                      .|| ::...|||......::.:.
Human   315 LASVTDSTQ-VNVPR-CLHF----------------------SGVGKVRQAACGGTGCAVLNGEG 355

  Fly   317 RVYSWGFGGFGR----LGHAEPKDEMVPRL---MKFFDTQGRGGRSVFCG-STFSLIVNELGLLF 373
            .|:.||:|..|:    :..|.|  ||:|..   :..|:.:.:..| :.|| |.|:.:.|: |.||
Human   356 HVFVWGYGILGKGPNLVESAVP--EMIPPTLFGLTEFNPEIQVSR-IRCGLSHFAALTNK-GELF 416

  Fly   374 LFGQNKK----TG--EANMYPKPVQDLSGWNIT------DIGC 404
            ::|:|.:    .|  |...:|        |.:|      |:.|
Human   417 VWGKNIRGCLGIGRLEDQYFP--------WRVTMPGEPVDVAC 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 13/51 (25%)
RCC1_2 171..200 CDD:290274 15/28 (54%)
RCC1 188..236 CDD:278826 17/50 (34%)
RCC1 239..312 CDD:278826 18/73 (25%)
RCC1 317..366 CDD:278826 16/56 (29%)
RCC1 414..465 CDD:278826
RCC1LNP_110425.2 RCC1 1. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 58..124
RCC1 2. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 128..191 15/63 (24%)
RCC1 130..189 CDD:278826 13/59 (22%)
RCC1_2 176..205 CDD:290274 4/28 (14%)
RCC1 3. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 193..247 15/57 (26%)
RCC1 195..245 CDD:278826 13/53 (25%)
RCC1_2 232..261 CDD:290274 15/28 (54%)
RCC1 4. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 248..300 17/53 (32%)
RCC1 248..298 CDD:278826 17/51 (33%)
RCC1 301..351 CDD:278826 18/73 (25%)
RCC1 5. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 302..353 18/74 (24%)
RCC1 6. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 354..411 16/59 (27%)
RCC1_2 396..425 CDD:290274 11/30 (37%)
RCC1 7. /evidence=ECO:0000255, ECO:0000305|PubMed:28608466 412..461 12/49 (24%)
RCC1 412..455 CDD:278826 12/49 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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