DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and AT4G14368

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001154232.2 Gene:AT4G14368 / 7922506 AraportID:AT4G14368 Length:1106 Species:Arabidopsis thaliana


Alignment Length:369 Identity:87/369 - (23%)
Similarity:157/369 - (42%) Gaps:61/369 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLF 183
            :|.|  ..|..|:....:...:.....|:||....:.:. :|.::..|...||...|.|.:||..
plant   275 IACG--VRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVC-RPKLVEFLALTNIDFVACGEYHTCA 336

  Fly   184 LTDTGTVYACGE--NKSGQCGVGNTHANIYSPTPIN--YRGPPIIRIGCGAEFSVILDIKGSLHT 244
            ::.:|.::..|:  :..|..|.|:..:: :.|..::  ..|..::.:.||...|.:....|.|.|
plant   337 VSTSGDLFTWGDGIHNVGLLGHGSDLSH-WIPKRVSGPVEGLQVLSVACGTWHSALATANGKLFT 400

  Fly   245 FGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHT 309
            ||...:|.|||.       :...:|:     ||:|.:            :.|::.:..|||..||
plant   401 FGDGAFGVLGHG-------DRESVSY-----PKEVKM------------LSGLKTLKVACGVWHT 441

  Fly   310 VAI----------DSKKRVYSWGFGGFGRLGHAEPKDEMVP----RLMKFFDTQGRGGRSVFCGS 360
            |||          .|.:::::||.|...||||...:..::|    .|:.:...|      :.||.
plant   442 VAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQ------IACGH 500

  Fly   361 TFSLIVNELGLLFLFG--QNKKTGEAN---MYPKPVQD-LSGWNITDIGCANTSI-MISADDTLI 418
            ||::.:...|.:|..|  .:.:.|.:|   ..|..||| |.|..:.:|.|.:..: ::::...:.
plant   501 TFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVF 565

  Fly   419 AWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462
            .||.... |.||.|:.....| |..|..|....:..::.|.:.|
plant   566 TWGKGSN-GRLGHGDKDDRKT-PTLVEALRERHVKSISCGSNFT 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 11/44 (25%)
RCC1_2 171..200 CDD:290274 7/30 (23%)
RCC1 188..236 CDD:278826 10/51 (20%)
RCC1 239..312 CDD:278826 20/72 (28%)
RCC1 317..366 CDD:278826 14/52 (27%)
RCC1 414..465 CDD:278826 12/49 (24%)
AT4G14368NP_001154232.2 PH_PLC_plant-like 17..128 CDD:270171
RCC1 289..337 CDD:278826 11/48 (23%)
RCC1 340..391 CDD:278826 10/51 (20%)
RCC1 395..444 CDD:278826 20/72 (28%)
RCC1 459..506 CDD:278826 14/52 (27%)
RCC1 509..558 CDD:278826 13/48 (27%)
RCC1 563..607 CDD:278826 11/45 (24%)
FYVE 613..680 CDD:214499
DASH_Spc19 <812..885 CDD:285487
BRX_N 853..887 CDD:290432
BRX 964..>994 CDD:285568
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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