DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9135 and Rcbtb1

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_082040.2 Gene:Rcbtb1 / 71330 MGIID:1918580 Length:531 Species:Mus musculus


Alignment Length:414 Identity:99/414 - (23%)
Similarity:159/414 - (38%) Gaps:85/414 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 GPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIP-ALEQL---NIVQAAVGR-HHT 181
            |.||...|.:..:.:...||.|.|..||...:     :.|::| .||.|   .|...:.|. .|.
Mouse    28 GTSANEAIYVTDNDEVFVFGLNYSNCLGTGDN-----QSTLVPKKLEALCGKKIKSLSYGSGPHV 87

  Fly   182 LFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPI--NYRGPPIIRIGCGAEFSVILDIKGSLHT 244
            |..|:.|.|||.|.|...|.|.|.|:..| :|..:  |.....:|.:.||:..|:.|...|.|..
Mouse    88 LLTTEDGVVYAWGHNGYSQLGNGTTNQGI-APVQVCTNLLIKQVIEVACGSHHSMALAADGELFA 151

  Fly   245 FGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHT 309
            :|....||:|..:.|.            :.:|:||...:...:           :|:.|||...:
Mouse   152 WGYNNCGQVGSGSTAN------------QPTPRKVTNCLHTKR-----------VVNIACGQTSS 193

  Fly   310 VAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLFL 374
            :|:.....||.||:.|.|:||.....:::.|  ::.....|.....:.||...:|.:.:.|||:.
Mouse   194 MAVLDSGEVYGWGYNGNGQLGLGNNGNQLTP--VRVAALHGMCVNQIVCGYAHTLALTDEGLLYA 256

  Fly   375 FGQNK----KTGEANMYPKPVQ---------DLSGWNITDIGCANT--------------SIMI- 411
            :|.|.    .||..|....|.|         :::..:.|....|.|              |::: 
Mouse   257 WGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILP 321

  Fly   412 ------SADDTLIAWGASPTFGELGIGEFQKSSTVPKEV------PKLDNIKIPQVTMGYSH--- 461
                  ..||....:|.......|...|.:...||.:.:      |:..::|. ::...|.|   
Mouse   322 HLTHFCCTDDVFACFGTPAVSWRLLSVEHEDFLTVAESLKKEFDSPETADLKF-RIDGKYIHVHK 385

  Fly   462 TVLLVDTTH-EATKQKY--EKMPE 482
            .||.:...| .:..|.|  |.|.|
Mouse   386 AVLKIRCEHFRSMFQSYWNEDMKE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 93/396 (23%)
Rcbtb1NP_082040.2 ATS1 37..311 CDD:444065 75/304 (25%)
RCC1 1 40..91 15/55 (27%)
RCC1 2 93..145 18/52 (35%)
RCC1 3 147..198 15/73 (21%)
RCC1 4 199..250 13/52 (25%)
RCC1 5 252..302 12/49 (24%)
RCC1 6 304..356 6/51 (12%)
BTB_POZ_RCBTB1_CLLD7 350..466 CDD:349662 14/61 (23%)
BACK_RCBTB1 466..531 CDD:350603
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.