DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9135 and ALS2

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_065970.2 Gene:ALS2 / 57679 HGNCID:443 Length:1657 Species:Homo sapiens


Alignment Length:241 Identity:55/241 - (22%)
Similarity:81/241 - (33%) Gaps:81/241 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 HTILINMDRKALGFGRNP--SGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGT 189
            |.:|:..|.:...||..|  ||.:.:     ....|.:..||....::..|.|..|:..:||.|.
Human    52 HGVLLTEDGEVYSFGTLPWRSGPVEI-----CPSSPILENALVGQYVITVATGSFHSGAVTDNGV 111

  Fly   190 VYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLG 254
            .|..|||.:|||.|.|..   |.|.|                                       
Human   112 AYMWGENSAGQCAVANQQ---YVPEP--------------------------------------- 134

  Fly   255 HNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVY 319
                       |.:|.                .:...:|:..|:|:..|||..||:|:...:.::
Human   135 -----------NPVSI----------------ADSEASPLLAVRILQLACGEEHTLALSISREIW 172

  Fly   320 SWGFG-GFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSL 364
            :||.| ..|.:..|.|    |.:..|.....||....|.||:..||
Human   173 AWGTGCQLGLITTAFP----VTKPQKVEHLAGRVVLQVACGAFHSL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 11/46 (24%)
RCC1_2 171..200 CDD:290274 10/28 (36%)
RCC1 188..236 CDD:278826 13/47 (28%)
RCC1 239..312 CDD:278826 10/72 (14%)
RCC1 317..366 CDD:278826 15/49 (31%)
RCC1 414..465 CDD:278826
ALS2NP_065970.2 RCC1 1. /evidence=ECO:0000305 59..108 12/53 (23%)
RCC1_2 93..122 CDD:290274 10/28 (36%)
RCC1 2. /evidence=ECO:0000305 109..167 24/126 (19%)
RCC1 109..165 CDD:278826 23/124 (19%)
RCC1 3. /evidence=ECO:0000305 169..218 15/50 (30%)
RCC1 170..216 CDD:278826 15/49 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..480
RCC1 4. /evidence=ECO:0000305 525..576
RCC1 527..574 CDD:278826
RCC1 5. /evidence=ECO:0000305 578..627
RCC1 579..625 CDD:278826
RhoGEF 695..879 CDD:295373
PH_alsin 905..1010 CDD:241423
PH 926..1004 CDD:278594
COG4642 1049..1188 CDD:226989
MORN 1 1049..1071
MORN 1049..1069 CDD:280628
MORN 2 1072..1094
MORN 3 1100..1122
MORN 1100..1120 CDD:280628
MORN 4 1123..1145
MORN 5 1151..1173
MORN 6 1175..1197
MORN 7 1198..1220
MORN 8 1221..1244
VPS9 1554..1653 CDD:280383
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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