DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and sergef

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_021329502.1 Gene:sergef / 565673 ZFINID:ZDB-GENE-061220-11 Length:397 Species:Danio rerio


Alignment Length:370 Identity:88/370 - (23%)
Similarity:149/370 - (40%) Gaps:84/370 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 EEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTI-IPALEQLNIVQAAV 176
            ||:.|.|..|  ..|:.||:...:.|..|:|..|||||...:::....|. :|...:  :.|.:.
Zfish    44 EEQIRAVTGG--GGHSALISDSGELLVCGQNHKGQLGLCHTLEIMTFQTCPLPGFGR--VQQVSC 104

  Fly   177 GRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRG--PPIIRIGCGAEFSVILDIK 239
            |...|:.||..|.|.|||.|..||  :|.:....:|..|:..:.  .|:..:..|...::.....
Zfish   105 GWDFTIILTGDGLVLACGSNAFGQ--LGGSAEKTHSAEPLLLKSFHEPVTSVAAGLRHALASTAS 167

  Fly   240 GSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFET------------SPKKVV--------LYIE 284
            |.::.:|      .|.::.||..:|...:..|..:            :.:||:        |.:.
Zfish   168 GCVYQWG------TGLSSHAKRMLNPQPVPSHLSSKEPCLVPGFAHVTTQKVIAGSAHCACLTVN 226

  Fly   285 -------KSKEGHV--------TPV-------DGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFG 327
                   .:|.|.:        .||       ...::.|...|..|.||.....||::||...:|
Zfish   227 GDVFLWGSNKHGQLISGSLFLPLPVALDRSMLQDERVSDVHSGWTHLVAQTESGRVFTWGRSNYG 291

  Fly   328 RLG---HAEPKDEMVPRLMK-------FFDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK--K 380
            :||   |:..|.....||::       .|     |...:.|||..:|.|.. |.:|.:|.|:  .
Zfish   292 QLGQTNHSMEKQSCDERLVRSPVEVKALF-----GATQISCGSEHNLAVVG-GRVFSWGWNEHGM 350

  Fly   381 TGEANM----YPKPVQDLSGWNITDIGC-ANTSIMI----SADDT 416
            .|:.::    .|:|:..|:......||| |..|:.:    |::|:
Zfish   351 CGDGSLQDITQPQPIPALADAVALLIGCGAGHSMALCSLKSSEDS 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 12/45 (27%)
RCC1_2 171..200 CDD:290274 11/28 (39%)
RCC1 188..236 CDD:278826 13/49 (27%)
RCC1 239..312 CDD:278826 18/114 (16%)
RCC1 317..366 CDD:278826 17/58 (29%)
RCC1 414..465 CDD:278826 1/3 (33%)
sergefXP_021329502.1 RCC1 13..387 CDD:332518 86/360 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5530
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.850

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