DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and RCC2

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001129676.1 Gene:RCC2 / 55920 HGNCID:30297 Length:522 Species:Homo sapiens


Alignment Length:507 Identity:226/507 - (44%)
Similarity:303/507 - (59%) Gaps:34/507 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AGGNG---AGPNKR-RPKKKESDYEDEFSDES------DDDGVQQQAAAANQMEVLIPHDD---- 57
            :.|||   |||.|| .|..::.:..:..|..|      |:||::...|.........|...    
Human    15 SSGNGTARAGPRKRGGPAGRKRERPERCSSSSGGGSSGDEDGLELDGAPGGGKRAARPATAGKAG 79

  Fly    58 -----LDPPSKLPEDLLATLEKTPGQMLIAGMVTWDLTGKRDRKNVTK-------VRPNLYSFHR 110
                 :..|....|.:.....|..||:||.|...|||.|   ||.|.|       :..||:..||
Human    80 GAAVVITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIG---RKEVPKQQAAYRNLGQNLWGPHR 141

  Fly   111 F---TEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIV 172
            :   ...:.|.|.||..|||::||..:.|...:|||..|||| ..|.|..|.|.:|..|....||
Human   142 YGCLAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLG-HGDTKRVEAPRLIEGLSHEVIV 205

  Fly   173 QAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD 237
            .||.||:|||.||:||:|:|.||||.||.|:||....:.||..|.|.|.||.::.||||||:|:|
Human   206 SAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMIMD 270

  Fly   238 IKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 302
            .||:|::||.|||||||||:|.|:...|.::.:..|..|::|.::|||:|:|.:.||..|.:.|.
Human   271 CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDV 335

  Fly   303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVN 367
            |||.|||:.:||:|||:||||||:|||||||.||||||||:|.||..|||...::.|.|.|..|:
Human   336 ACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCSFAVS 400

  Fly   368 ELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIG 432
            |:|.||.:|....:.|:.||||.||||.||.|..:.|..:||:::||::.|:||.||||||||.|
Human   401 EVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGELGYG 465

  Fly   433 EFQ-KSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTHEATKQKYEKMPEY 483
            :.: ||||..:||..||.|...||.|||||::::.....|..|:|.:|:|||
Human   466 DHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESETEKEKIKKLPEY 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 22/44 (50%)
RCC1_2 171..200 CDD:290274 19/28 (68%)
RCC1 188..236 CDD:278826 25/47 (53%)
RCC1 239..312 CDD:278826 35/72 (49%)
RCC1 317..366 CDD:278826 32/48 (67%)
RCC1 414..465 CDD:278826 29/51 (57%)
RCC2NP_001129676.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83 16/67 (24%)
RCC1 1 103..165 24/64 (38%)
ATS1 <151..481 CDD:227511 173/330 (52%)
RCC1 2 168..219 24/51 (47%)
RCC1 3 221..271 26/49 (53%)
RCC1 4 273..347 34/73 (47%)
Required for interaction with RAC1. /evidence=ECO:0000269|PubMed:28869598 318..325 3/6 (50%)
RCC1 5 348..401 34/52 (65%)
RCC1 6 403..447 19/43 (44%)
RCC1 7 448..501 28/52 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 502..522 7/16 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156531
Domainoid 1 1.000 44 1.000 Domainoid score I12317
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10282
Inparanoid 1 1.050 413 1.000 Inparanoid score I1857
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54771
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 1 1.000 - - FOG0006921
OrthoInspector 1 1.000 - - oto91207
orthoMCL 1 0.900 - - OOG6_105844
Panther 1 1.100 - - LDO PTHR46207
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5530
SonicParanoid 1 1.000 - - X4391
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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