DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and HERC5

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_011530324.2 Gene:HERC5 / 51191 HGNCID:24368 Length:1100 Species:Homo sapiens


Alignment Length:398 Identity:95/398 - (23%)
Similarity:156/398 - (39%) Gaps:111/398 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GAGPNK----RRPKKKESDYEDEFSDESDDDGVQQQAAAANQMEVLIPHDDL---DPPSKLPEDL 68
            |.||.|    ||.::|           |..:|......||.......|...|   ...:.|...|
Human   144 GLGPRKAAMERRSRRK-----------SRRNGRSTAGKAAATQPAKSPGAQLWLFPSAAGLHRAL 197

  Fly    69 LATLEKT------PGQMLI-----AGMVTWDLT----GKRDRKNVTKVRPNL------------- 105
            |..:|.|      ||::.:     ||:....|.    |.|..|.: |:..|:             
Human   198 LRRVEVTRQLCCSPGRLAVLERGGAGVQVHQLLAGSGGARTPKCI-KLGKNMKIHSVDQGAEHML 261

  Fly   106 -------------YSFH--RF----TEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLS 151
                         ||..  ||    .|:|...:..|.  .|::.::...:...:|:|..||||:.
Human   262 ILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCGD--YHSLALSKGGELFAWGQNLHGQLGVG 324

  Fly   152 QDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPI 216
            :.......|.|:..|..:.:.|.:.|..|::.|:.:|.:|:.|:|:.||.|:|:|.:.       
Human   325 RKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESK------- 382

  Fly   217 NYRGPPIIR---------IGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHF 272
              ..|.:|.         :.||...|.:|...|.|.|||..::||||||:      ..|:|    
Human   383 --DDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNS------TQNEL---- 435

  Fly   273 ETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVA-IDSKKRVYSWGFGGFGRLGHAEPKD 336
                          :...|..:.|.::...|||..||:| :....:|:|:|.|..|:||:...:|
Human   436 --------------RPCLVAELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRD 486

  Fly   337 EMVPRLMK 344
            :::|..:|
Human   487 QLMPLPVK 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 12/44 (27%)
RCC1_2 171..200 CDD:290274 8/28 (29%)
RCC1 188..236 CDD:278826 14/56 (25%)
RCC1 239..312 CDD:278826 21/73 (29%)
RCC1 317..366 CDD:278826 10/28 (36%)
RCC1 414..465 CDD:278826
HERC5XP_011530324.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.010

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