DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and rcbtb2

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001004950.1 Gene:rcbtb2 / 448359 XenbaseID:XB-GENE-952598 Length:526 Species:Xenopus tropicalis


Alignment Length:440 Identity:102/440 - (23%)
Similarity:175/440 - (39%) Gaps:89/440 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QQA---AAANQMEVLIPHDDLDPPSKLPEDLLATLEKTPGQMLIAGMVTWDLTGKRDRKNVTKVR 102
            |||   .|.|::..|..:|                     ::.:.|..:....|..|.:::.:.|
 Frog    22 QQACVFGAGNEVLYLTKND---------------------EVFVMGTNSSGCLGTGDAQSILEPR 65

  Fly   103 P-NLYSFHRFTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPAL 166
            . ::.|..|.....|   .|||   |.:::..|.:...:|.|...|||.....:......:...|
 Frog    66 RIDMLSGKRIVSLSY---GSGP---HVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVSTNL 124

  Fly   167 EQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN--YRGPPIIRIGCG 229
            .....:..|.|.||::.||..|.|||.|.|.|||.|.|:| ||...|..:.  .:...:|.|.||
 Frog   125 INKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGST-ANQPIPRKVTSCLQNKTVIGIACG 188

  Fly   230 AEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPV 294
            ...|:.:...|.::.:|....||||..:...            :.:|.:            :..:
 Frog   189 QMSSMAVVDNGEVYAWGYNGNGQLGLGSSGN------------QPTPCR------------IAAL 229

  Fly   295 DGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCG 359
            .|:::....||..||:|:..:..:|:||...:|:||.....::..|  ::....:.|......|.
 Frog   230 QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP--VQVIVDKERIVEIAACH 292

  Fly   360 STF-SLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITD--IGCANT-SIM-----ISADD 415
            |:. |...::.|.::::||.:  |::.:.|    .|:.::.||  ..|.:| :||     :..||
 Frog   293 SSHTSAAKSQSGQVYMWGQCR--GQSVITP----HLTHFSCTDDVFACFSTPAIMWRLLSVEPDD 351

  Fly   416 TLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLL 465
            .|       |..|....||...:|...:. .:|...|      |.|.|||
 Frog   352 HL-------TVAESLKREFDNPNTADLKF-LVDEKYI------YVHKVLL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 10/44 (23%)
RCC1_2 171..200 CDD:290274 13/28 (46%)
RCC1 188..236 CDD:278826 20/49 (41%)
RCC1 239..312 CDD:278826 12/72 (17%)
RCC1 317..366 CDD:278826 11/49 (22%)
RCC1 414..465 CDD:278826 13/50 (26%)
rcbtb2NP_001004950.1 ATS1 <17..269 CDD:227511 70/298 (23%)
RCC1 250..298 CDD:366085 10/49 (20%)
BTB_POZ 349..465 CDD:365784 15/53 (28%)
BACK_RCBTB2 462..526 CDD:350604
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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