DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and rcc1

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_998343.1 Gene:rcc1 / 406457 ZFINID:ZDB-GENE-040426-2216 Length:418 Species:Danio rerio


Alignment Length:405 Identity:104/405 - (25%)
Similarity:154/405 - (38%) Gaps:94/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSG--- 199
            |..|:...|||||.:|:...:||.::...|  .||||..|..||:.|:|||.||..|.|..|   
Zfish    38 LVLGQGDVGQLGLGEDVMERKKPALVTLPE--GIVQAVAGGMHTVCLSDTGNVYTFGCNDEGALG 100

  Fly   200 ----------------------QCGVGNTHA----------------------NIYSP------- 213
                                  |...|::|:                      .:..|       
Zfish   101 RDTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWGSFRDNNGVIGLLEPMKKCTVP 165

  Fly   214 --TPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVN-ANKLSFHFETS 275
              .||:   .|:::|..|.:..|:|...|.|:|.|..|.||||.  .|::|.| ..:........
Zfish   166 VKVPID---KPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGR--VAEHFANRGGRKGLMRLLE 225

  Fly   276 PKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVP 340
            |:.|:          :.|...|...|..||...|.|:..:..||.:|...:.:||........||
Zfish   226 PQMVI----------IKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGLSNYHQLGTQSTNTCFVP 280

  Fly   341 RLMKFFDTQ-------GRGGRSVFC----GSTFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDL 394
            ..:..|...       ..|.....|    |..:||...|.|.|   |..|..||.: .|..|..:
Zfish   281 VKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRL---GLGKDVGEKS-EPTVVPGI 341

  Fly   395 SGWNITDIGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEV--PKLDNIKIPQVTM 457
            |...:...| |:.|..::...::.:||..... :||.|| ::....|.|:  .:|:|..:..|:.
Zfish   342 SDVQVVACG-ASVSYAVTKQGSVFSWGMGTNL-QLGTGE-EEDEWSPVEMTGKQLENRVVLSVSS 403

  Fly   458 GYSHTVLLVDTTHEA 472
            |..||||||....|:
Zfish   404 GGQHTVLLVKDKQES 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 103/400 (26%)
rcc1NP_998343.1 RCC1 34..82 CDD:395335 18/45 (40%)
ATS1 70..414 CDD:444065 91/365 (25%)

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