DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and Als2

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001013431.1 Gene:Als2 / 363235 RGDID:1310372 Length:1651 Species:Rattus norvegicus


Alignment Length:402 Identity:75/402 - (18%)
Similarity:128/402 - (31%) Gaps:136/402 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 HTILINMDRKALGFGRNPSGQLGLSQDIKLA-EKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTV 190
            |.:|:..|.:...||..|    ..|:..::. ..|.:..||...::|..|.|..|:..:|::|.|
  Rat    52 HGVLLTEDGEVYSFGTLP----WKSEAAEICPSSPLLESALVGHHVVTVATGSFHSGAVTESGVV 112

  Fly   191 YACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGH 255
            |..|||.:|||.|.| ...:..|:|::.                                     
  Rat   113 YMWGENAAGQCAVAN-QQYVSEPSPVSI------------------------------------- 139

  Fly   256 NTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYS 320
                                           .:...:|:..|:|:..|||..||:|:...:.:::
  Rat   140 -------------------------------SDSETSPLLAVRILQLACGEEHTLALSISREIWA 173

  Fly   321 WGFG-GFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSL-------------------- 364
            ||.| ..|.:....|    |.:..|.....||....|.||:..||                    
  Rat   174 WGTGCQLGLITTTFP----VTKPQKVEHLAGRVVLQVACGAFHSLALVQCLPPQDLKPVPERCNQ 234

  Fly   365 ---------------IVNE-----LGLLFLFGQNKKTGEANMYPKPVQDLSG-WNITDIGCANTS 408
                           |:::     ||:.....|.:|.......|.| :.|.| ..:.:...|...
  Rat   235 CSQLLITMTDKEDHVIISDSHCCPLGVTLSESQAEKHASTVTSPHP-ETLDGQGEVFENTVAEAE 298

  Fly   409 IMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTHEAT 473
            :.:.:|.|......|.....:|:.|...:.|.| ..|....:           |..|...:..:.
  Rat   299 LNMGSDQTTSGSAISAQQNIVGMAEVSSARTAP-SYPDTQTV-----------TAYLQKLSEHSV 351

  Fly   474 KQKY---EKMPE 482
            |:.:   ||:|:
  Rat   352 KENHEREEKLPQ 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 71/384 (18%)
Als2NP_001013431.1 ATS1 <18..219 CDD:444065 51/243 (21%)
RCC1 1 59..108 12/52 (23%)
RCC1 2 109..167 22/126 (17%)
RCC1 3 169..218 14/52 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 444..476
RCC1 4 519..570
ATS1 522..>622 CDD:444065
RCC1 5 572..621
RhoGEF 689..873 CDD:470622
PH_alsin 899..1004 CDD:241423
COG4642 <1012..1243 CDD:443680
MORN 1 1043..1065
MORN 2 1066..1088
MORN 3 1094..1116
MORN 4 1117..1139
MORN 5 1145..1167
MORN 6 1169..1191
MORN 7 1192..1214
MORN 8 1215..1238
VPS9 1546..1650 CDD:460489
Blue background indicates that the domain is not in the aligned region.

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