Sequence 1: | NP_001285655.1 | Gene: | CG9135 / 33850 | FlyBaseID: | FBgn0031769 | Length: | 487 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008761185.1 | Gene: | Herc6 / 362376 | RGDID: | 1561739 | Length: | 1027 | Species: | Rattus norvegicus |
Alignment Length: | 331 | Identity: | 85/331 - (25%) |
---|---|---|---|
Similarity: | 137/331 - (41%) | Gaps: | 57/331 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 159 KPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGP-P 222
Fly 223 IIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSK 287
Fly 288 EGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLG-------HAEPKDEMVPRLMKF 345
Fly 346 FDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK--------KTGEANMY-PKPVQDLSGWNITD 401
Fly 402 IGCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKL-DNI--KIPQVTMGYSHTV 463
Fly 464 LLVDTT 469 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9135 | NP_001285655.1 | RCC1 | 139..184 | CDD:278826 | 8/24 (33%) |
RCC1_2 | 171..200 | CDD:290274 | 11/28 (39%) | ||
RCC1 | 188..236 | CDD:278826 | 17/48 (35%) | ||
RCC1 | 239..312 | CDD:278826 | 16/72 (22%) | ||
RCC1 | 317..366 | CDD:278826 | 15/55 (27%) | ||
RCC1 | 414..465 | CDD:278826 | 14/53 (26%) | ||
Herc6 | XP_008761185.1 | RCC1 | 39..88 | CDD:278826 | 17/49 (35%) |
RCC1 | 92..141 | CDD:278826 | 16/71 (23%) | ||
RCC1 | 144..194 | CDD:278826 | 15/57 (26%) | ||
RCC1_2 | 182..210 | CDD:290274 | 8/27 (30%) | ||
RCC1_2 | 236..265 | CDD:290274 | 7/33 (21%) | ||
RCC1 | 252..299 | CDD:278826 | 14/51 (27%) | ||
HECTc | 682..1023 | CDD:238033 | |||
HECTc | 706..1023 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |