DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and herc1

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_021333508.2 Gene:herc1 / 336598 ZFINID:ZDB-GENE-030131-8542 Length:4867 Species:Danio rerio


Alignment Length:375 Identity:103/375 - (27%)
Similarity:175/375 - (46%) Gaps:55/375 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 TEEKYRYVASGPSAAH----------TILINMDRKALGFGRNPSGQLGL--SQDIKLAEKPTIIP 164
            |:||.......||.:.          |.:|:.|......|:...|:|||  |.:....:|.|..|
Zfish   384 TQEKILQPKLAPSFSDAQTIEAGQYCTFVISSDGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEP 448

  Fly   165 --ALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN--YRGPPIIR 225
              |:::::..:.:.|  |||..|..|.|::.|:...|:.|.||:....| |..|.  .:|..::.
Zfish   449 HRAIKKVSSSKGSDG--HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKY-PKLIQGPLQGKVVVC 510

  Fly   226 IGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGH 290
            :..|...|..:...|.|:|:|..::|:|||.       ::|  |.:..|..|.:      |..|.
Zfish   511 VSAGYRHSAAVSEDGELYTWGEGDFGRLGHG-------DSN--SRNIPTLVKDI------SNVGE 560

  Fly   291 VTPVDGVQIVDFACGNNHTVAIDSKKR-VYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGR 354
            |           :||::||:|:....| |:|:|.|..|:|||.:......|::::..  ||...|
Zfish   561 V-----------SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEAL--QGMFIR 612

  Fly   355 SVFCGSTFSLIVNELGLLFLFGQNKKTG----EAN-MYPKPVQDLSGWNITDIGCANT-SIMISA 413
            .|..||..||.:...|.::.:|.....|    ||. :.||.:::|:...:.||...:: .:.:|.
Zfish   613 KVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSH 677

  Fly   414 DDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTV 463
            |:.:.||| :.:.|:.|.|......|.||:|..||.:.|.|::.|.||::
Zfish   678 DNEVYAWG-NNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSL 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 100/368 (27%)
herc1XP_021333508.2 None

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