Sequence 1: | NP_001285655.1 | Gene: | CG9135 / 33850 | FlyBaseID: | FBgn0031769 | Length: | 487 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009301513.1 | Gene: | herc1 / 336598 | ZFINID: | ZDB-GENE-030131-8542 | Length: | 4867 | Species: | Danio rerio |
Alignment Length: | 375 | Identity: | 103/375 - (27%) |
---|---|---|---|
Similarity: | 175/375 - (46%) | Gaps: | 55/375 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 112 TEEKYRYVASGPSAAH----------TILINMDRKALGFGRNPSGQLGL--SQDIKLAEKPTIIP 164
Fly 165 --ALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN--YRGPPIIR 225
Fly 226 IGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGH 290
Fly 291 VTPVDGVQIVDFACGNNHTVAIDSKKR-VYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGR 354
Fly 355 SVFCGSTFSLIVNELGLLFLFGQNKKTG----EAN-MYPKPVQDLSGWNITDIGCANT-SIMISA 413
Fly 414 DDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTV 463 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9135 | NP_001285655.1 | RCC1 | 139..184 | CDD:278826 | 14/48 (29%) |
RCC1_2 | 171..200 | CDD:290274 | 8/28 (29%) | ||
RCC1 | 188..236 | CDD:278826 | 13/49 (27%) | ||
RCC1 | 239..312 | CDD:278826 | 19/72 (26%) | ||
RCC1 | 317..366 | CDD:278826 | 18/49 (37%) | ||
RCC1 | 414..465 | CDD:278826 | 18/50 (36%) | ||
herc1 | XP_009301513.1 | RCC1 | 369..726 | CDD:332518 | 103/373 (28%) |
SPRY_HERC1 | 2004..2161 | CDD:293939 | |||
UBA_HERC1 | 2729..2772 | CDD:270584 | |||
WD40 | 3406..3773 | CDD:330360 | |||
WD40 repeat | 3419..3452 | CDD:293791 | |||
WD40 repeat | 3479..3514 | CDD:293791 | |||
WD40 repeat | 3527..3569 | CDD:293791 | |||
WD40 repeat | 3575..3611 | CDD:293791 | |||
WD40 repeat | 3618..3660 | CDD:293791 | |||
WD40 repeat | 3665..3710 | CDD:293791 | |||
WD40 | 3737..>3831 | CDD:330360 | |||
WD40 repeat | 3749..3784 | CDD:293791 | |||
RCC1 | 4004..4351 | CDD:332518 | |||
HECTc | 4479..4847 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |