DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and CG7420

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001259871.1 Gene:CG7420 / 33332 FlyBaseID:FBgn0031344 Length:388 Species:Drosophila melanogaster


Alignment Length:380 Identity:87/380 - (22%)
Similarity:145/380 - (38%) Gaps:117/380 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 FGRNPSGQLGLSQDIKLAEKP------TIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKS 198
            :|.|..|||||..:.:|...|      :..||  |:.:::...|  |.|.|..:|.::|||.|..
  Fly     6 WGANSHGQLGLGFESELCMTPQRVAKCSFAPA--QVRLIRGGGG--HVLILDTSGRIHACGWNNR 66

  Fly   199 GQCGVGNT---HANIYSPTPINYRGP-PIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDA 259
            ||.|:.:|   |:. :...|..|.|. |:..|.||.:.|..:.:...|..:|...:.|||     
  Fly    67 GQLGLDSTEECHSE-FKMIPTEYFGDVPVETISCGWDISGAI
TLTKRLFVWGSNAFQQLG----- 125

  Fly   260 KYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFG 324
                 ..:..|.....|..|.|..|          :..|.:.|  |..|...:....::|.    
  Fly   126 -----ICQRGFTAVRRPMPVKLPRE----------EPAQRISF--GLRHCAVL
TQDNKIYV---- 169

  Fly   325 GFGRLGHAEP------------------------------------KDEMVPRLMKFFDTQGRGG 353
             ||||...:|                                    ::.||   :|..|....||
  Fly   170 -FGRLRIMDPPPIELDITATCLHRCNTVKIQVHNPNELRIVSISSGQNHMV---LKCADLSETGG 230

  Fly   354 RSVFCGSTFSLIVNELGLLFLFGQNKKTGEAN--MYPKPVQDLS-GWNITDIGCANTSIMISADD 415
                 |||..::.        .|.| |.|::|  .:.:.|:.|: ||.      .|.:::  .::
  Fly   231 -----GSTKRILT--------LGDN-KFGQSNAFQFEEDVRQLAVGWT------HNAAVL--KNN 273

  Fly   416 TLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQ------VTMGYSHTVL 464
            .::.||.: .:|:||:|.|.:...:|..:    .:|:|:      :.||..|.:|
  Fly   274 EILVWGRN-CYGQLGMGSFSEQQAIPTPL----RLKLPEDQGPARIHMGAEHGLL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 15/49 (31%)
RCC1_2 171..200 CDD:290274 9/28 (32%)
RCC1 188..236 CDD:278826 18/51 (35%)
RCC1 239..312 CDD:278826 14/72 (19%)
RCC1 317..366 CDD:278826 15/84 (18%)
RCC1 414..465 CDD:278826 14/57 (25%)
CG7420NP_001259871.1 RCC1 2..52 CDD:278826 15/49 (31%)
RCC1 55..107 CDD:278826 18/52 (35%)
RCC1 112..161 CDD:278826 14/70 (20%)
RCC1_2 256..285 CDD:290274 7/37 (19%)
RCC1 274..320 CDD:278826 12/50 (24%)
RCC1 328..>348 CDD:278826
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442613
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5530
SonicParanoid 00.000 Not matched by this tool.
54.780

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