Sequence 1: | NP_001285655.1 | Gene: | CG9135 / 33850 | FlyBaseID: | FBgn0031769 | Length: | 487 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_017451567.1 | Gene: | Herc1 / 315771 | RGDID: | 1306366 | Length: | 4876 | Species: | Rattus norvegicus |
Alignment Length: | 450 | Identity: | 125/450 - (27%) |
---|---|---|---|
Similarity: | 193/450 - (42%) | Gaps: | 92/450 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 DLDPPSKLPEDLLATLEKTPGQMLIAGM------------VTWDLTGKRDRKNVTKVRPNLYSF- 108
Fly 109 ---HRFTEEKYRYV---ASGPSAAH----------TILINMDRKALGFGRNPSGQLGL--SQDIK 155
Fly 156 LAEKPTIIPALEQLNIVQAAV---GRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN 217
Fly 218 -YRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVL 281
Fly 282 YIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSK-KRVYSWGFGGFGRLGHAEPKDEMVPRLMKF 345
Fly 346 FDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK----KTGEANMYPKPVQ--DLSGWNITD--I 402
Fly 403 GCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9135 | NP_001285655.1 | RCC1 | 139..184 | CDD:278826 | 12/49 (24%) |
RCC1_2 | 171..200 | CDD:290274 | 7/31 (23%) | ||
RCC1 | 188..236 | CDD:278826 | 13/48 (27%) | ||
RCC1 | 239..312 | CDD:278826 | 24/72 (33%) | ||
RCC1 | 317..366 | CDD:278826 | 15/48 (31%) | ||
RCC1 | 414..465 | CDD:278826 | 16/48 (33%) | ||
Herc1 | XP_017451567.1 | RCC1 | 421..472 | CDD:278826 | |
RCC1 | 476..526 | CDD:278826 | |||
RCC1 | 529..576 | CDD:278826 | |||
RCC1 | 579..629 | CDD:278826 | |||
RCC1 | 633..680 | CDD:278826 | |||
RCC1_2 | 667..696 | CDD:290274 | |||
RCC1 | 683..733 | CDD:278826 | |||
SPRY_HERC1 | 2030..2187 | CDD:293939 | |||
UBA_HERC1 | 2751..2794 | CDD:270584 | |||
WD40 | 3409..3793 | CDD:225201 | |||
WD40 | 3439..3790 | CDD:295369 | |||
WD40 repeat | 3447..3490 | CDD:293791 | |||
WD40 repeat | 3504..3539 | CDD:293791 | |||
WD40 repeat | 3544..3591 | CDD:293791 | |||
WD40 repeat | 3600..3638 | CDD:293791 | |||
WD40 repeat | 3644..3679 | CDD:293791 | |||
WD40 repeat | 3687..3718 | CDD:293791 | |||
WD40 repeat | 3765..3801 | CDD:293791 | |||
RCC1 | 4060..4112 | CDD:278826 | 13/54 (24%) | ||
RCC1 | 4115..4164 | CDD:278826 | 13/49 (27%) | ||
RCC1 | 4167..4216 | CDD:278826 | 24/72 (33%) | ||
RCC1 | 4219..4269 | CDD:278826 | 15/51 (29%) | ||
RCC1 | 4272..4321 | CDD:278826 | 14/48 (29%) | ||
RCC1_2 | 4308..4337 | CDD:290274 | 10/30 (33%) | ||
RCC1 | 4325..4373 | CDD:278826 | 16/48 (33%) | ||
HECTc | 4488..4856 | CDD:238033 | |||
HECTc | 4519..4852 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |