Sequence 1: | NP_001285655.1 | Gene: | CG9135 / 33850 | FlyBaseID: | FBgn0031769 | Length: | 487 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006229362.1 | Gene: | Herc2 / 308669 | RGDID: | 1307989 | Length: | 4836 | Species: | Rattus norvegicus |
Alignment Length: | 512 | Identity: | 118/512 - (23%) |
---|---|---|---|
Similarity: | 190/512 - (37%) | Gaps: | 160/512 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 69 LATLEKTPGQMLIAGMV---TWDLTGKRDRKNVTKVR----PNLYSFHRFTE----------EKY 116
Fly 117 RYVASGP------------------------SAAHTILINMDRKA-------------------- 137
Fly 138 -LGFG-------RNPSG--------QLGLSQDIKLAEK----------------------PTIIP 164
Fly 165 ALEQLNIVQAAV--GRHHTLFLTDTGTVYACGENKSGQCGVGNT----HANIYSPTPINYRGPPI 223
Fly 224 IRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKE 288
Fly 289 GHVTP-----VDGVQIVDFACGNN--HTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFF 346
Fly 347 DTQGRGGRSVFCGSTFSLIVNELGLLFLFGQ--NKKTG----EANMYPKPVQDLSGWNITDIGCA 405
Fly 406 NTSIMISADDTLI-AWGASPT---FGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMG 458 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9135 | NP_001285655.1 | RCC1 | 139..184 | CDD:278826 | 19/83 (23%) |
RCC1_2 | 171..200 | CDD:290274 | 12/30 (40%) | ||
RCC1 | 188..236 | CDD:278826 | 14/51 (27%) | ||
RCC1 | 239..312 | CDD:278826 | 18/79 (23%) | ||
RCC1 | 317..366 | CDD:278826 | 17/48 (35%) | ||
RCC1 | 414..465 | CDD:278826 | 11/49 (22%) | ||
Herc2 | XP_006229362.1 | ATS1 | <494..787 | CDD:227511 | 82/313 (26%) |
Cyt-b5 | 1212..1283 | CDD:395121 | |||
MIB_HERC2 | 1871..1931 | CDD:399589 | |||
UBA_HERC2 | 2461..2508 | CDD:270585 | |||
Cul7 | 2555..2632 | CDD:402903 | |||
SH3_15 | 2640..2697 | CDD:408152 | |||
ZZ_HERC2 | 2707..2751 | CDD:239084 | |||
APC10-HERC2 | 2766..2911 | CDD:176485 | |||
ATS1 | 2957..3323 | CDD:227511 | |||
ATS1 | 4025..4330 | CDD:227511 | |||
HECTc | 4423..4794 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |