DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and SPAC10F6.04

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001342701.1 Gene:SPAC10F6.04 / 2542973 PomBaseID:SPAC10F6.04 Length:351 Species:Schizosaccharomyces pombe


Alignment Length:362 Identity:90/362 - (24%)
Similarity:142/362 - (39%) Gaps:105/362 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 LGFGRNPSGQLGLSQDIKLAEKPTIIP---ALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSG 199
            |..|.|.:.||||:.| :....|.|:|   |:|::     :.|.:|||.|.:...::|||:|:.|
pombe     3 LSLGSNGNFQLGLNND-EDVYSPQIVPFDRAIEKI-----SCGGNHTLLLDEDSQLWACGDNRKG 61

  Fly   200 QCGVGNTHANIYSPTPINYRGPPIIRI------------GCGAEFSVILDI-KGSLHTFGLPEYG 251
            |||. .....:|:|.     .|..:||            .||.|||||:.. :..:.:.|....|
pombe    62 QCGY-EVKEPLYNPL-----SPDYLRIFTRVSHERWVFLTCGWEFSVIVHADRRRVCSCGEGLSG 120

  Fly   252 QLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQ-IVDFACGNNHTVAIDSK 315
            :||....:    |:..|                  :|..:..:|..: |:|.:.|..|.:.:.::
pombe   121 ELGQGNRS----NSQGL------------------REIDIPYLDDKEFIIDISAGLRHWICVTNE 163

  Fly   316 KRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGR-----SVFCGSTFSLIVNELGLLFLF 375
            ..:|..|.|..|:||         |.:||..:.....||     :|.||..||.::.|.|.:.:.
pombe   164 GNLYGCGDGRKGQLG---------PVVMKTVNKVSFLGRIEHAQAVVCGVQFSAVLQETGHVIVL 219

  Fly   376 GQNKKTGEANMYPKPVQDLSGWNIT---DIGCANTSIMISADDTLIA-W---------GASPTFG 427
            |..|                 ||:.   |...||.|.:.|:..::.| |         |....||
pombe   220 GGEK-----------------WNVAAECDAWQANNSELSSSICSISANWSTLSLLSTEGCVYAFG 267

  Fly   428 ELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVL 464
            .  ....||:.|...:        |.|:..|..|.:|
pombe   268 R--CDRAQKAHTKASD--------IVQIASGTEHNIL 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 16/47 (34%)
RCC1_2 171..200 CDD:290274 9/28 (32%)
RCC1 188..236 CDD:278826 19/59 (32%)
RCC1 239..312 CDD:278826 12/73 (16%)
RCC1 317..366 CDD:278826 16/53 (30%)
RCC1 414..465 CDD:278826 13/61 (21%)
SPAC10F6.04NP_001342701.1 ATS1 1..351 CDD:227511 90/362 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5530
SonicParanoid 1 1.000 - - X4391
TreeFam 00.000 Not matched by this tool.
43.840

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