Sequence 1: | NP_001285655.1 | Gene: | CG9135 / 33850 | FlyBaseID: | FBgn0031769 | Length: | 487 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006511166.1 | Gene: | Herc1 / 235439 | MGIID: | 2384589 | Length: | 4885 | Species: | Mus musculus |
Alignment Length: | 450 | Identity: | 125/450 - (27%) |
---|---|---|---|
Similarity: | 193/450 - (42%) | Gaps: | 92/450 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 57 DLDPPSKLPEDLLATLEKTPGQMLIAGM------------VTWDLTGKRDRKNVTKVRPNLYSF- 108
Fly 109 ---HRFTEEKYRYV---ASGPSAAH----------TILINMDRKALGFGRNPSGQLGL--SQDIK 155
Fly 156 LAEKPTIIPALEQLNIVQAAV---GRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN 217
Fly 218 -YRGPPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVL 281
Fly 282 YIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSK-KRVYSWGFGGFGRLGHAEPKDEMVPRLMKF 345
Fly 346 FDTQGRGGRSVFCGSTFSLIVNELGLLFLFGQNK----KTGEANMYPKPVQ--DLSGWNITD--I 402
Fly 403 GCANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHT 462 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG9135 | NP_001285655.1 | RCC1 | 139..184 | CDD:278826 | 12/49 (24%) |
RCC1_2 | 171..200 | CDD:290274 | 7/31 (23%) | ||
RCC1 | 188..236 | CDD:278826 | 13/48 (27%) | ||
RCC1 | 239..312 | CDD:278826 | 24/72 (33%) | ||
RCC1 | 317..366 | CDD:278826 | 15/48 (31%) | ||
RCC1 | 414..465 | CDD:278826 | 16/48 (33%) | ||
Herc1 | XP_006511166.1 | ATS1 | 374..731 | CDD:227511 | |
SPRY_HERC1 | 2039..2196 | CDD:293939 | |||
UBA_HERC1 | 2760..2803 | CDD:270584 | |||
WD40 | 3448..3799 | CDD:392136 | |||
WD40 repeat | 3456..3499 | CDD:293791 | |||
WD40 repeat | 3513..3548 | CDD:293791 | |||
WD40 repeat | 3610..3648 | CDD:293791 | |||
WD40 repeat | 3653..3689 | CDD:293791 | |||
WD40 repeat | 3697..3736 | CDD:293791 | |||
WD40 repeat | 3774..3810 | CDD:293791 | |||
ATS1 | 4022..4370 | CDD:227511 | 106/390 (27%) | ||
HECTc | 4497..4865 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.820 |