DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9135 and Eea1

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_006513585.1 Gene:Eea1 / 216238 MGIID:2442192 Length:1458 Species:Mus musculus


Alignment Length:163 Identity:39/163 - (23%)
Similarity:69/163 - (42%) Gaps:30/163 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKKESDY---EDEFSDESDDDGVQQQAAAANQMEVLIPHDDLDPPSKLPEDLLA---TLEKTPGQ 78
            :||:.||   |::.::||         |:...::..:...||| ..:|...|.|   :|::..|:
Mouse   359 QKKDLDYTHLEEKHNEES---------ASRKTLQASLHQRDLD-CQQLQARLTASESSLQRAQGE 413

  Fly    79 MLIAGMVTWDLTGKRDRKNVTKVRPNL----YSFHRFTEEKYRY---VASGPSAAHTILINMDRK 136
            :.........|  :.:.:.|...|.:|    ....:..|||.::   :....|..|..|:..:|:
Mouse   414 LSEKAEAAQKL--REELREVESTRQHLKVEVKQLQQQREEKEQHGLQLQGEVSQLHCKLLETERQ 476

  Fly   137 ALG--FGRNPSGQLGLSQDIKLAEKPTIIPALE 167
             ||  .||... |..||.: ||.||...:..|:
Mouse   477 -LGEAHGRLKE-QRQLSSE-KLMEKEQQVADLQ 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 11/31 (35%)
RCC1_2 171..200 CDD:290274
RCC1 188..236 CDD:278826
RCC1 239..312 CDD:278826
RCC1 317..366 CDD:278826
RCC1 414..465 CDD:278826
Eea1XP_006513585.1 SMC_prok_B <130..794 CDD:274008 39/163 (24%)
Smc 504..1346 CDD:224117 1/3 (33%)
FYVE_EEA1 1394..1456 CDD:277269
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.