DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and Rpgr

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001171421.2 Gene:Rpgr / 19893 MGIID:1344037 Length:1001 Species:Mus musculus


Alignment Length:430 Identity:108/430 - (25%)
Similarity:168/430 - (39%) Gaps:138/430 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FTEEKYRYVASGPSA---------------AHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKP 160
            ||..|.::..:.||.               .||.::..:.|...||.|..|||||.....:. ||
Mouse    15 FTFGKTKFAENIPSKFWFKNDIPICLSCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAII-KP 78

  Fly   161 TIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNT------------------- 206
            |.|.||:...:..||.||:|||..||||.|||.|.|..||.|:|:|                   
Mouse    79 TCIKALKPEKVKLAACGRNHTLVSTDTGGVYAAGGNNEGQLGLGDTDDRDTFHQIVFFTPADTIK 143

  Fly   207 ---------------------------------HANIYSPTPINYRGPPIIRIGCGAEFSVILDI 238
                                             .:|:..|..:.. |.||..|.||...|..:.:
Mouse   144 QLSAGANTSAALTEDGKLFMWGDNSEGQIGLEDKSNVCIPHEVTV-GKPISWISCGYYHSAFVTM 207

  Fly   239 KGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFA 303
            .|.|:|||.||.|:||         ..|:|..: ..||::|:...|:             ::..|
Mouse   208 DGELYTFGEPENGKLG---------LPNELLMN-HRSPQRVLGIPER-------------VIQVA 249

  Fly   304 CGNNHTVAIDSKKRVYSWGFGGFGRLG-------HAEPKDEMVPRLMKFFDTQGRGGRSVFCGST 361
            ||..|||.: ::|.||::|.|.||:||       .:|||  ::.|:      :.:....:.||..
Mouse   250 CGGGHTVVL-TEKVVYAFGLGQFGQLGLGTFLFETSEPK--IIERI------KDQKICHISCGEN 305

  Fly   362 FSLIVNELGLLFLFGQNK--KTG------EANMYPKPVQDLSGWNITDIGCANTSIMISADDTLI 418
            .:.::.|||||:.||..:  |.|      ....:|....:...:.:..|.|....:::.      
Mouse   306 HTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCHMLVF------ 364

  Fly   419 AWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMG 458
               |:|..|.:             :.||.:::..|.::.|
Mouse   365 ---ATPRLGTI-------------DEPKFEDVYEPYISTG 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 105/422 (25%)
RpgrNP_001171421.2 RCC1 1 54..105 23/51 (45%)
RCC1 2 106..158 11/51 (22%)
RCC1 3 159..208 9/49 (18%)
RCC1 4 209..261 22/75 (29%)
RCC1 5 262..313 14/58 (24%)
RCC1 6 314..367 11/61 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..428
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 631..738
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 794..869
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 902..925
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 962..1001
Blue background indicates that the domain is not in the aligned region.

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