DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and W09G3.7

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001021671.2 Gene:W09G3.7 / 173245 WormBaseID:WBGene00012370 Length:404 Species:Caenorhabditis elegans


Alignment Length:391 Identity:97/391 - (24%)
Similarity:164/391 - (41%) Gaps:83/391 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FTEEKYRYVASGPSAAHTILINMDRKALGFGRNPSGQLG-------LSQDIKLAEKPTIIPALEQ 168
            |..:..::::||...:   |.....:..|.|.|...|:|       ..||..::.|...||..| 
 Worm    63 FNTKSIKFISSGFGFS---LFASKNRLYGAGINNRFQIGGQLTNINKYQDYYISAKKINIPGDE- 123

  Fly   169 LNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCG---------VGNTHANIYSPTPINY-RGPPI 223
              |::.:.||.|:|..|:.| |:|.|:|..||||         ||:..:.:   .|::: ...||
 Worm   124 --ILEISSGRAHSLIRTNLG-VFAIGDNNFGQCGRNPENMDYVVGSEESPL---LPLSFPTSEPI 182

  Fly   224 IRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKE 288
            |.|.|..:.|.::|..|::.:|||.|.||.|:.            ::..:..|.||...:|.|| 
 Worm   183 ISIHCSMDTSFVVDSSGAVFSFGLNEDGQCGNE------------AYGIQWEPAKVRGDVEGSK- 234

  Fly   289 GHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGG 353
              :..|.|......||..|        ..::.||...:|:...|..:.::        :|.....
 Worm   235 --IQKVSGSTDTLLACSEN--------GEIFIWGQTEYGQAAGATDEIQL--------NTSRHVA 281

  Fly   354 RS---VFC-GSTFSLIV--NELGLLFLFGQNKKTGEANMYPK------PVQD----LSGWNITDI 402
            .|   :.| .||.|.:|  |..|.:|::|    .|...|.|:      |.|.    ..|..:|.:
 Worm   282 NSLGPIICVDSTQSSVVARNSRGNVFVWG----VGVLGMGPEAESLKTPTQMDQPLFDGKMVTSV 342

  Fly   403 GCANTSI-MISADDTLIAWGASPTFGELGIGEFQKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLV 466
            ...|:.: .|:.|..|..||.: .:..||:|. ||....|.::....:::  :..:|..|::.||
 Worm   343 SAGNSCMSAINEDGRLFIWGEN-RYSSLGLGH-QKRQLFPYQLFLPGDVR--KAALGPDHSLFLV 403

  Fly   467 D 467
            :
 Worm   404 N 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 16/51 (31%)
RCC1_2 171..200 CDD:290274 11/28 (39%)
RCC1 188..236 CDD:278826 18/57 (32%)
RCC1 239..312 CDD:278826 19/72 (26%)
RCC1 317..366 CDD:278826 10/52 (19%)
RCC1 414..465 CDD:278826 12/50 (24%)
W09G3.7NP_001021671.2 ATS1 <108..347 CDD:227511 72/280 (26%)
RCC1 142..195 CDD:278826 17/55 (31%)
RCC1 198..239 CDD:278826 14/55 (25%)
RCC1 355..402 CDD:278826 12/50 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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