DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and Herc2

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_034548.2 Gene:Herc2 / 15204 MGIID:103234 Length:4836 Species:Mus musculus


Alignment Length:353 Identity:95/353 - (26%)
Similarity:153/353 - (43%) Gaps:57/353 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 KALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQ 200
            |...:|.|...|||..:..|: :.|:....|..||:||.|.|......:|..|.||:|||..:|:
Mouse  2961 KVFVWGLNDKDQLGGLKGSKI-KVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGR 3024

  Fly   201 CGVGNTHANIYSPTPINYRGPPIIR---IGCGAEFSVILDIKGSLHTFGLPEYGQLGH----NTD 258
            .|:|.:...:..|..|......:::   :..|...:..|.:.|.:.::|..:.|:|||    |.|
Mouse  3025 LGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCD 3089

  Fly   259 AKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGF 323
            ....:.|.|..                            :|.|.|||::|:.|:.|...:|:||.
Mouse  3090 KPRLIEALKTK----------------------------RIRDIACGSSHSAALTSSGELYTWGL 3126

  Fly   324 GGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGS--TFSLIVNELGLLFLFGQNK--KTG-- 382
            |.:|||||.:...::.|:::|..  .|.....|.|||  ..:|.:.:.||:|.:|...  |.|  
Mouse  3127 GEYGRLGHGDNTTQLKPKMVKVL--LGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

  Fly   383 --EANMYPKPVQDLSGWNITDIGC-ANTSIMISADDTLIAWGASPTFGELGIGEFQKSSTV---- 440
              |....|:.::.|:|..:..|.| |..|:.::....:..||....| .||.|     |.|    
Mouse  3190 GSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYF-RLGHG-----SDVHVRK 3248

  Fly   441 PKEVPKLDNIKIPQVTMGYSHTVLLVDT 468
            |:.|..|...||..|.:|..|.:.:.|:
Mouse  3249 PQVVEGLRGKKIVHVAVGALHCLAVTDS 3276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 95/353 (27%)
Herc2NP_034548.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 58..90
RCC1 1-1 416..462
ATS1 456..776 CDD:444065
RCC1 1-2 463..513
RCC1 1-3 514..569
RCC1 1-4 570..621
RCC1 1-5 624..675
RCC1 1-6 676..727
RCC1 1-7 729..779
Cyt-b5 1212..1283 CDD:459698
MIB_HERC2 1871..1931 CDD:461991
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2351..2376
UBA_HERC2 2461..2508 CDD:270585
Cul7 2555..2632 CDD:463286
SH3_15 2640..2697 CDD:465720
ZZ_HERC2 2707..2751 CDD:239084
APC10-HERC2 2766..2911 CDD:176485
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2928..2947
RCC1 2-1 2959..3010 15/49 (31%)
ATS1 2962..3302 CDD:444065 94/352 (27%)
RCC1 2-2 3011..3065 13/53 (25%)
RCC1 2-3 3066..3117 17/78 (22%)
RCC1 2-4 3119..3169 17/51 (33%)
RCC1 2-5 3172..3223 14/50 (28%)
RCC1 2-6 3225..3275 16/55 (29%)
RCC1 2-7 3276..3327 0/1 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3479..3499
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3517..3537
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3604..3632
ATS1 3946..4294 CDD:444065
RCC1 3-1 3953..4004
RCC1 3-2 4006..4058
RCC1 3-3 4060..4110
RCC1 3-4 4112..4164
RCC1 3-5 4166..4216
RCC1 3-6 4218..4268
RCC1 3-7 4270..4320
HECTc 4423..4794 CDD:238033
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 4806..4836
Blue background indicates that the domain is not in the aligned region.

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