DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and Rcbtb2

DIOPT Version :10

Sequence 1:NP_608985.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_598844.3 Gene:Rcbtb2 / 105670 MGIID:1917200 Length:551 Species:Mus musculus


Alignment Length:344 Identity:81/344 - (23%)
Similarity:141/344 - (40%) Gaps:53/344 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAV---GRH 179
            |..||.|...|:   ...|.|..|:.|...|...::::|              |.||.|   ..:
Mouse     9 YGESGKSVQATL---SSLKMLDVGKWPIFSLCSEEELQL--------------IRQACVFGSAGN 56

  Fly   180 HTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVIL-DIKGSLH 243
            ..|:.|....::..|.|.||..|||:..:.|......:..|..|..:..|:...::| ...|.:.
Mouse    57 EVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF 121

  Fly   244 TFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 308
            |:|...|.|||:.|     .|...:..|..|:                  :...|:::.|||:.|
Mouse   122 TWGHNAYSQLGNGT-----TNHGLVPCHISTN------------------LSNKQVIEVACGSYH 163

  Fly   309 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGSTFSLIVNELGLLF 373
            ::.:.|...|::||:...|::|.....::.:||.:... .|.:...::.||...|:.|.:.|.::
Mouse   164 SLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGC-LQNKVVMNIACGQMCSMAVVDTGEVY 227

  Fly   374 LFGQNKK----TGEANMYPKP--VQDLSGWNITDIGCANTSIMISADD-TLIAWGASPTFGELGI 431
            ::|.|..    .|.:...|.|  |..|.|..:..:.|.....::..|: .:.||||: ::|:||.
Mouse   228 VWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGAN-SYGQLGT 291

  Fly   432 GEFQKSSTVPKEVPKLDNI 450
            |.....|.....|.:.|.|
Mouse   292 GNKSNQSYPTPVVVEKDRI 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_608985.1 ATS1 119..469 CDD:444065 80/343 (23%)
Rcbtb2NP_598844.3 RCC1 1. /evidence=ECO:0000255 64..115 12/50 (24%)
ATS1 <71..335 CDD:444065 64/265 (24%)
RCC1 2. /evidence=ECO:0000255 117..169 16/74 (22%)
RCC1 3. /evidence=ECO:0000255 171..222 12/51 (24%)
RCC1 4. /evidence=ECO:0000255 223..274 10/50 (20%)
RCC1 5. /evidence=ECO:0000255 276..326 12/36 (33%)
RCC1 6. /evidence=ECO:0000255 328..382
BTB_POZ_RCBTB2_CHC1L 374..490 CDD:349663
BACK_RCBTB2 487..551 CDD:350604
Blue background indicates that the domain is not in the aligned region.

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