DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9135 and LOC100536575

DIOPT Version :9

Sequence 1:NP_001285655.1 Gene:CG9135 / 33850 FlyBaseID:FBgn0031769 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_009295984.1 Gene:LOC100536575 / 100536575 -ID:- Length:409 Species:Danio rerio


Alignment Length:300 Identity:74/300 - (24%)
Similarity:110/300 - (36%) Gaps:71/300 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 GPSA---------------AHTILINMDRKALGFGRNPSGQLGLSQDIKL-AEKPTIIPALE--- 167
            ||||               .|..|...||..|...:....||...::.:| ||....:|.:.   
Zfish   109 GPSAQVCASQGCTDALISETHLTLSFTDRVELWEIKPQQNQLVWKREHELSAEHTAALPLVSGGF 173

  Fly   168 -----------QLNIVQAAVGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPIN-YRG 220
                       :|..|...:|..|.|.||..||:|:.|....||.|.| ...::..|..:. ..|
Zfish   174 VQHKPPFFHPLKLCAVSLVLGSEHALLLTADGTLYSWGSGSHGQLGHG-VLTSLEDPQAVEALWG 237

  Fly   221 PPIIRIGCGAEFSVILDIKGSLHTFGLPEYGQLG----------------------HNTDAKYFV 263
            .||..:..|...|..:...|.|:.:|..|.||||                      .|||.|   
Zfish   238 VPIKAVAAGNWHSAAVSSGGDLYMWGWNESGQLGLPSRGLEEEKRRGNGSGNDDQPINTDGK--- 299

  Fly   264 NANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGR 328
            :...:....:..|..|.:            .:..:|...:||:.||.|:.|...:|:||:|.:|:
Zfish   300 SRTDVFISIQAFPALVDI------------ANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQ 352

  Fly   329 LGHAEPKDEMVPRLMKFFDTQGRGGRSVFCGS--TFSLIV 366
            |||........|..:.:|.:.....:.|.|||  ||..:|
Zfish   353 LGHGTEHSTDEPTPVDYFSSHSLSVKDVVCGSWNTFVSVV 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9135NP_001285655.1 RCC1 139..184 CDD:278826 11/59 (19%)
RCC1_2 171..200 CDD:290274 10/28 (36%)
RCC1 188..236 CDD:278826 14/48 (29%)
RCC1 239..312 CDD:278826 19/94 (20%)
RCC1 317..366 CDD:278826 16/50 (32%)
RCC1 414..465 CDD:278826
LOC100536575XP_009295984.1 RCC1_2 189..217 CDD:290274 10/27 (37%)
RCC1 204..253 CDD:278826 14/49 (29%)
RCC1_2 240..269 CDD:290274 7/28 (25%)
RCC1 257..336 CDD:278826 19/93 (20%)
RCC1_2 323..352 CDD:290274 11/28 (39%)
RCC1 340..389 CDD:278826 15/48 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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