DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pfas and pfas

DIOPT Version :9

Sequence 1:NP_477212.1 Gene:Pfas / 33847 FlyBaseID:FBgn0000052 Length:1354 Species:Drosophila melanogaster
Sequence 2:NP_001038667.1 Gene:pfas / 570437 ZFINID:ZDB-GENE-030131-4420 Length:1314 Species:Danio rerio


Alignment Length:1370 Identity:703/1370 - (51%)
Similarity:905/1370 - (66%) Gaps:74/1370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVILRYYDVQAHSAAEEESVLRRLREEDGAVVSVRMERCYHLEYSAQAEHSLALDELLVWLVKQP 65
            |.::|:|..:   ...|...:||:.:....|: :..|.||::|.......|:|..::|.||...|
Zfish     1 MPVVRFYRTE---ETGEARAIRRIAQLYPDVI-ITTELCYNVELDGPDSLSVAQKDILRWLFSPP 61

  Fly    66 LSKGQSLSRQPALQSTGSSQLLLEIGPRFNFSTPYSTNCVNIFQNLGYSEVRRMETSTRYLVTFG 130
            .|  .||..:|.|::...:: |:|||||.||||.:|||.|:|.|:.|.|:|.|:|.|.|:|:...
Zfish    62 YS--VSLLEEPTLKAEHGAR-LVEIGPRLNFSTAWSTNAVSICQSAGLSQVTRVELSRRHLIKPQ 123

  Fly   131 EGSKA----PEAARFVPLLGDRMTQCLYTEENTPKASFDEQLPERQANWHFVPVLEEGRAALERI 191
            ||.|.    .|....:..|.|.||:|:|.:   |..||...:  |..:...|.:|.:||||||:.
Zfish   124 EGCKVGMKDGEMESLISCLYDSMTECIYAQ---PITSFAVDI--RPQDVFEVDILGKGRAALEKA 183

  Fly   192 NQELGLAFNDYDLDYYHDLFAKELGRNPTTVELFDCAQSNSEHSRHWFFRGRMVIDGVEQPKSLI 256
            |.||||||:.:|||||..||.| :.||||:||.||.|||||||||||||||||||||.||.::|.
Zfish   184 NDELGLAFDSWDLDYYTALFQK-VKRNPTSVECFDLAQSNSEHSRHWFFRGRMVIDGKEQKETLF 247

  Fly   257 RMIMDTQAHTNPNNTIKFSDNSSAMVGFDHQTIVPSSVVAPGAVRLQSVQSDLIFTAETHNMPTA 321
            .:||.||.|:|.||.|||.||||.:.|.:.:.:.|::.........:.....:||||||||.||.
Zfish   248 SLIMGTQQHSNQNNVIKFCDNSSGIKGMELRCMYPTNPAQASPYESRDTTRHVIFTAETHNFPTG 312

  Fly   322 VAPFSGATTGTGGRLRDVQGVGRGGVPIAGTAGYCVGALHIPGYKQPYEPLDFKYPATFAPPLQV 386
            ||||||||||||||:||||..|:||..||||||||.|.|||||:..|:|...::||::|||||||
Zfish   313 VAPFSGATTGTGGRIRDVQSAGKGGHVIAGTAGYCFGNLHIPGFVLPWEEEGWEYPSSFAPPLQV 377

  Fly   387 LIEASNGASDYGNKFGEPVISGFALSYGLNSAADASQRDEYVKPIMFSGGLGTM--PATMREKLP 449
            .||||:|||||||||||||::|||.|:|:..|  ..:|.|::||||||||||::  |...:::..
Zfish   378 AIEASDGASDYGNKFGEPVLAGFARSFGMRLA--NGERREWIKPIMFSGGLGSIEDPHVRKDQAE 440

  Fly   450 PARGQLLAKIGGPVYRIGVGGGAASSVEIQGSGDAELDFNAVQRGDAEMENKLNRVVRACLDLGE 514
            |  |..:.|||||||||||||||||||::||...:..|..||||||||||.|:||.:||||:..|
Zfish   441 P--GMEVVKIGGPVYRIGVGGGAASSVQVQGDNSSARDLGAVQRGDAEMEQKMNRALRACLERVE 503

  Fly   515 QNPILAIHDQGAGGNGNVLKELVEPGFAGAVIFSKEFQLGDPTITALELWGAEYQENNAILCNAD 579
            .|||.:||||||||||||||||.||  |||||::::|:.||||::.||||||||||:||:|....
Zfish   504 GNPICSIHDQGAGGNGNVLKELSEP--AGAVIYTEKFKRGDPTLSVLELWGAEYQESNALLLRPS 566

  Fly   580 QRELLEKICRRERCPISFVGVVTGDGRVTLLEKPAPKD--LEQALNASNRSEVSPFDLELKYVLG 642
            .|..||::|:||:||:.|||.:||||::.|::....::  ||.|.|        |.||||.:|||
Zfish   567 DRSFLERVCQREKCPVDFVGKITGDGKIVLVDGLRKQNDVLEGARN--------PVDLELDWVLG 623

  Fly   643 DMPKRTYDLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKVDRCVGGLIAQQQCVG 707
            .||::.:.|:.....|:.|:||.||.:..||||||.|.||.|||:|||||||.|.||:|||||||
Zfish   624 KMPQKEFILEHRSVSLQPLTLPAGLSVLPALERVLRLPAVASKRYLTNKVDRSVTGLVAQQQCVG 688

  Fly   708 PLQAPLADYALTTVSHFSHSGIATSIGTQPLKGLLDPAAMARMCVAEALSNLVFVKISELADVKC 772
            ||..||||.|:..:|.||..|.||:||.||:||||.|||.|||.|.|||:||||.::|.|.||||
Zfish   689 PLHTPLADVAVVALSPFSLQGAATAIGEQPIKGLLSPAAGARMAVGEALTNLVFARVSALKDVKC 753

  Fly   773 SGNWMWAAKLPGEGARMFDACKELCQILEELHIAIDGGKDSLSMAAKVGGETIKSPGTLVISTYA 837
            |||||||||||||||.::|||:.:|:::.:|.:|:|||||||||||:|.|||:|:||:||||.||
Zfish   754 SGNWMWAAKLPGEGACLWDACQAMCEVMGQLGVAVDGGKDSLSMAARVSGETVKAPGSLVISVYA 818

  Fly   838 PCPDVRLKVTPDLKGPGAGSKTSLLWINLE-NSARLGGSALAQAYAQQGKDTPNLTRSDVLGKAF 901
            .|||:...|||||..|  ..|..||::.:. ...|||||||||.:.|.|..:|::.:.|.|...|
Zfish   819 VCPDITATVTPDLDNP--EGKGVLLYVPVSAGKYRLGGSALAQCFGQLGDCSPDMDQPDKLSACF 881

  Fly   902 AVTQSLLGDGLIQAGHDVSDGGLLVCVLEMAIGGLSGLRVDLSEPLAKLKNFDKSVEKLNRPELA 966
            ..||:|:.|.|:.||||||||||:.|:||||..|..|:.|||  ||       :.|:.:.     
Zfish   882 NTTQTLIQDRLLTAGHDVSDGGLISCLLEMAFAGNYGIEVDL--PL-------EGVDVME----- 932

  Fly   967 VLFAEECGWVVEVLDTDLERVRSTYEKAGVPNYYLGVTEGFGLDSRVVLKNGKSELLDQPLRVLY 1031
            .||:||...|:||.:.:...|...|..||:..:.:|.|.|||.|::|.:.....|:|::.|..|.
Zfish   933 ALFSEELSLVLEVCERNASSVCQRYTDAGLLCHRIGTTSGFGPDAKVRVSLCGREVLNERLPTLR 997

  Fly  1032 KKWERTSYELEKLQANPECAEAEYNSLEYRQAPQYRGPQNVQAELTLKRSSAPV---------RV 1087
            ..||.||:|||:|||||.|.:.|...|..|..|..:        ||...|..|:         ||
Zfish   998 AIWESTSFELERLQANPLCVQEEEQGLASRTQPYLK--------LTFDPSQTPIIKELATGKARV 1054

  Fly  1088 AVLREEGVNSEREMMACLLRANFEVHDVTMSDLLQGTASVSQYRGLIFPGGFSYADTLGSAKGWA 1152
            ||:||||.|.:|||.|.|..|.|||.||||.||..|:.::..:|.::|.|||||||.||||||||
Zfish  1055 AVVREEGSNGDREMSASLFMAGFEVWDVTMQDLCSGSTTLDPFRAVVFVGGFSYADVLGSAKGWA 1119

  Fly  1153 ANILHNPRLLPQFEAFKRRQDVFSLGICNGCQLMTLIGFVGSAKSEVGADPDVALLHNKSQRFEC 1217
            |.:..|.|...:||.|::|:|..|||:||||||:.|:|:||  :.|.|.. ||.|.||||.|||.
Zfish  1120 ATVTFNNRAREEFERFRKREDTLSLGVCNGCQLLALLGWVG--EREDGGS-DVTLTHNKSGRFES 1181

  Fly  1218 RWATVKIPSNRSIMLGSMKDLVLGCWVAHGEGRFAFRDEKLISHLQSEQLVTLQYVDDVGKPTEL 1282
            |:.:|.|..:.:|||..|:...||.|||||||...||..:....|....|..|:||||.|.|||:
Zfish  1182 RFVSVGILPSPAIMLKGMEGSALGVWVAHGEGLMQFRSPEAQQKLIGSSLAPLRYVDDSGNPTEI 1246

  Fly  1283 YPLNPNGSPQGIAGLCSSDGRHLALMPHPERCSSMYQWPYVPSSFEVSPTQSESPWQIMFNNAYN 1347
            ||:|||||.||:||:||:||||||:||||||....:||.:.|.....|  ...|||..||.||..
Zfish  1247 YPINPNGSAQGVAGICSADGRHLAMMPHPERAVLSWQWAWAPQHLRGS--LEPSPWLSMFRNAAA 1309

  Fly  1348 WCVKS 1352
            ||..|
Zfish  1310 WCQNS 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PfasNP_477212.1 PLN03206 18..1349 CDD:178745 696/1348 (52%)
PurL_repeat1 223..612 CDD:100034 238/390 (61%)
PurL_repeat2 715..1004 CDD:100035 148/289 (51%)
GATase_5 1085..1349 CDD:290241 140/272 (51%)
pfasNP_001038667.1 PLN03206 30..1312 CDD:178745 694/1333 (52%)
PurL_repeat1 214..602 CDD:100034 238/393 (61%)
PurL_repeat2 696..970 CDD:100035 148/289 (51%)
GATase_5 1051..1311 CDD:290241 140/264 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587054
Domainoid 1 1.000 289 1.000 Domainoid score I1526
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5970
Inparanoid 1 1.050 1285 1.000 Inparanoid score I159
OMA 1 1.010 - - QHG55304
OrthoDB 1 1.010 - - D38224at2759
OrthoFinder 1 1.000 - - FOG0004359
OrthoInspector 1 1.000 - - oto40790
orthoMCL 1 0.900 - - OOG6_101332
Panther 1 1.100 - - LDO PTHR10099
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2247
SonicParanoid 1 1.000 - - X3082
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.900

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