DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pfas and pfas

DIOPT Version :9

Sequence 1:NP_477212.1 Gene:Pfas / 33847 FlyBaseID:FBgn0000052 Length:1354 Species:Drosophila melanogaster
Sequence 2:NP_001135692.3 Gene:pfas / 100216263 XenbaseID:XB-GENE-6001438 Length:1324 Species:Xenopus tropicalis


Alignment Length:1365 Identity:720/1365 - (52%)
Similarity:911/1365 - (66%) Gaps:65/1365 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MVILRYYDVQAHSAAEEESVLRRLREEDGAVVSVRMERCYHLEYSAQAEHSLALDELLVWLVKQP 65
            ||:|.:|    .|.......||....|:  :.|::.|.||::.::..|..|....:.|.||...|
 Frog     1 MVVLHFY----RSLQNSSETLRLPGAEN--IQSLQRELCYNVNWTGPAAPSSQETDALRWLFSCP 59

  Fly    66 LSKGQSLSRQPALQSTGSSQLLLEIGPRFNFSTPYSTNCVNIFQNLGYSEVRRMETSTRYLVTFG 130
            ... ||:|...:|.|. .|.||:|||||.||||..|||.|:|.:::|.:.|.|:|.|.|||:.|.
 Frog    60 FDP-QSISDTSSLHSE-PSDLLVEIGPRLNFSTATSTNAVSICRSVGLTNVDRIECSKRYLIKFQ 122

  Fly   131 EGSKAPEAARFVPLLGDRMTQCLYTEENTPKASFDEQL-PERQANWHFVPVLEEGRAALERINQE 194
            ...:..|....:..|.||||:|:|.|   |..||:..: ||:.   :.|.:|.:||||||:.|.|
 Frog   123 TRPQGSEEQELLASLYDRMTECVYPE---PVRSFEVSVRPEKV---YEVDILGQGRAALEKANTE 181

  Fly   195 LGLAFNDYDLDYYHDLFAKELGRNPTTVELFDCAQSNSEHSRHWFFRGRMVIDGVEQPKSLIRMI 259
            |||||:.:|||||..|| :.:||||::||.||.|||||||||||||:|::.:||.|:..||..||
 Frog   182 LGLAFDSWDLDYYSSLF-QRVGRNPSSVECFDLAQSNSEHSRHWFFKGKLKVDGQEKEMSLFDMI 245

  Fly   260 MDTQAHTNPNNTIKFSDNSSAMVGFDHQTIVPSSVVAPGAVRLQSVQSDLIFTAETHNMPTAVAP 324
            |.||..:||||.|||.|||||:.|.:..:::|:.....|...|......|||||||||.||.|||
 Frog   246 MKTQDTSNPNNVIKFCDNSSAIQGREVASLIPTDPSCAGPYHLCRSTRHLIFTAETHNFPTGVAP 310

  Fly   325 FSGATTGTGGRLRDVQGVGRGGVPIAGTAGYCVGALHIPGYKQPYEPLDFKYPATFAPPLQVLIE 389
            |||||||||||:||||..|||...||||||||.|.||||||..|:|.|.::||..||.||:|.||
 Frog   311 FSGATTGTGGRIRDVQSTGRGAHVIAGTAGYCFGNLHIPGYSLPWEDLAYQYPVQFARPLEVAIE 375

  Fly   390 ASNGASDYGNKFGEPVISGFALSYGLNSAADASQRDEYVKPIMFSGGLGTMPATMREKLPPARGQ 454
            ||||||||||||||||::|||.|:||.  ..:.:|.|:|||||||||:|:|....|.|..|..|.
 Frog   376 ASNGASDYGNKFGEPVLAGFARSFGLR--LPSGERREWVKPIMFSGGIGSMEDVHRTKEAPEPGM 438

  Fly   455 LLAKIGGPVYRIGVGGGAASSVEIQGSGDAELDFNAVQRGDAEMENKLNRVVRACLDLGEQNPIL 519
            .:.|:||||||||||||||||:::||...:||||.||||||||||.|:||.||||::.|.:|||.
 Frog   439 HVVKVGGPVYRIGVGGGAASSIQVQGDNASELDFGAVQRGDAEMEQKMNRAVRACVERGGKNPIC 503

  Fly   520 AIHDQGAGGNGNVLKELVEPGFAGAVIFSKEFQLGDPTITALELWGAEYQENNAILCNADQRELL 584
            :||||||||||||||||.||  .||||::|.|||||||::.||:|||||||:||:|...|..|.|
 Frog   504 SIHDQGAGGNGNVLKELSEP--QGAVIYTKSFQLGDPTLSVLEIWGAEYQESNALLLRPDDAEFL 566

  Fly   585 EKICRRERCPISFVGVVTGDGRVTLLEKPAPKDLEQALNASNRSEVSPFDLELKYVLGDMPKRTY 649
            ..:|||||.|:.|||.:|||||:.|:.   ..|.:.|.::::|:.| |.||:|::|||.||::.:
 Frog   567 RSVCRRERSPVDFVGKITGDGRIVLIN---GSDTDPAPDSTDRNAV-PVDLQLEWVLGKMPRKEF 627

  Fly   650 DLKREQTPLKELSLPKGLLLDEALERVLSLVAVGSKRFLTNKVDRCVGGLIAQQQCVGPLQAPLA 714
            .|.|....|:.|.||.||.:.:||:|||.|.:|.|||:|||||||.|.||:|||||||||..|||
 Frog   628 VLNRVAPNLQPLVLPSGLTVGQALDRVLRLPSVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLA 692

  Fly   715 DYALTTVSHFSHSGIATSIGTQPLKGLLDPAAMARMCVAEALSNLVFVKISELADVKCSGNWMWA 779
            |.|:.::|:....|.||:||.||:|.||:|||.||:.|||||:||:|.::::|.|||||||||||
 Frog   693 DVAVVSLSYSDIVGGATAIGEQPIKSLLNPAAGARLAVAEALTNLLFAQVTDLKDVKCSGNWMWA 757

  Fly   780 AKLPGEGARMFDACKELCQILEELHIAIDGGKDSLSMAAKVGGETIKSPGTLVISTYAPCPDVRL 844
            ||||||||.::|||..:|.::.:|.:|||||||||||||:||.||:|:||:||||.||.|||:..
 Frog   758 AKLPGEGALLYDACAAMCDVMAQLGVAIDGGKDSLSMAARVGTETVKAPGSLVISVYAVCPDITT 822

  Fly   845 KVTPDLKGPGAGSKTSLLWINL-ENSARLGGSALAQAYAQQGKDTPNLTRSDVLGKAFAVTQSLL 908
            .||||||.|  |.|..||::.| ....|||||||||.|:|.|:..|:|.....|...|.|||.||
 Frog   823 TVTPDLKNP--GQKGVLLYLPLCPGQHRLGGSALAQCYSQLGETPPDLDDPQTLISCFNVTQQLL 885

  Fly   909 GDGLIQAGHDVSDGGLLVCVLEMAIGGLSGLRVDLSEPLAKLKNFDKSVEKLNRPELAVLFAEEC 973
            .|.::.||||||||||:.|:||||..|..||.:::|.....:              |.:|||||.
 Frog   886 RDRVLSAGHDVSDGGLVTCILEMAFAGNCGLDIEISSSCTNV--------------LELLFAEEP 936

  Fly   974 GWVVEVLDTDLERVRSTYEKAGVPNYYLGVTEGFGLDSRVVLKNGKSELLDQPLRVLYKKWERTS 1038
            |.|:||.:..:|.|...|..|||....:|.|:..|..|.|.::....|::::.|..|...||.||
 Frog   937 GLVLEVAEQSVELVMERYRAAGVECVRIGCTKERGPASMVRIRANGQEVVNEKLGSLRAVWEETS 1001

  Fly  1039 YELEKLQANPECAEAEYNSLEYRQAPQYRGPQNVQAELTLKRSSAPV----------RVAVLREE 1093
            ::||:|||||.|...|...|..|:.|.|        .||...|..|:          ||||:|||
 Frog  1002 FQLERLQANPSCVSQEEAGLRVREGPSY--------HLTFNPSEIPLVPPSVGGNQPRVAVVREE 1058

  Fly  1094 GVNSEREMMACLLRANFEVHDVTMSDLLQGTASVSQYRGLIFPGGFSYADTLGSAKGWAANILHN 1158
            |.|.:|||.|.||.|.|:|.||||.|||.|..::..:|||:|.|||||||.|||||||||::..|
 Frog  1059 GSNGDREMAASLLMAGFQVWDVTMEDLLAGGTTLDSFRGLVFVGGFSYADVLGSAKGWAASVKFN 1123

  Fly  1159 PRLLPQFEAFKRRQDVFSLGICNGCQLMTLIGFVG--SAKSEVGADP--DVALLHNKSQRFECRW 1219
            ..:..|||.|:||.|.||||:|||||||.|:|:||  :....||..|  .|.|.||.|.|||.|:
 Frog  1124 ASVREQFENFRRRADTFSLGVCNGCQLMALLGWVGPDNPTDTVGDLPTQGVLLSHNLSGRFESRF 1188

  Fly  1220 ATVKIPSNRSIMLGSMKDLVLGCWVAHGEGRFAFRDEKLISHLQSEQLVTLQYVDDVGKPTELYP 1284
            .|:||..:.||:|..|....||.|||||||...||..|:..::.|..|..|.||||.|||||.||
 Frog  1189 VTLKIQQSPSILLRGMAGSTLGVWVAHGEGYMRFRSPKVQDYVTSNHLAPLCYVDDGGKPTEEYP 1253

  Fly  1285 LNPNGSPQGIAGLCSSDGRHLALMPHPERCSSMYQWPYVPSSFEVSPTQSESPWQIMFNNAYNWC 1349
            :||||||.|||||||:||||||:|||||||...:|||::|.|:..|  ...|||..:|.|.|.||
 Frog  1254 MNPNGSPLGIAGLCSADGRHLAMMPHPERCVMKWQWPWMPESWRHS--LDVSPWMRLFQNGYRWC 1316

  Fly  1350  1349
             Frog  1317  1316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PfasNP_477212.1 PLN03206 18..1349 CDD:178745 713/1346 (53%)
PurL_repeat1 223..612 CDD:100034 245/388 (63%)
PurL_repeat2 715..1004 CDD:100035 150/289 (52%)
GATase_5 1085..1349 CDD:290241 152/277 (55%)
pfasNP_001135692.3 PurL1 24..1317 CDD:330252 712/1338 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 305 1.000 Domainoid score I1365
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5970
Inparanoid 1 1.050 1326 1.000 Inparanoid score I151
OMA 1 1.010 - - QHG55304
OrthoDB 1 1.010 - - D38224at2759
OrthoFinder 1 1.000 - - FOG0004359
OrthoInspector 1 1.000 - - oto103103
Panther 1 1.100 - - LDO PTHR10099
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3082
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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