DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtmr9

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001072833.1 Gene:mtmr9 / 780294 XenbaseID:XB-GENE-1000525 Length:549 Species:Xenopus tropicalis


Alignment Length:543 Identity:183/543 - (33%)
Similarity:286/543 - (52%) Gaps:40/543 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVI-ARVEKIGGATSRGENSYG-IEIFC 129
            |:..||:|.|.:|.:.|...|.....:|        |.:: |.::.|   ..|...:.| |.|..
 Frog    20 PFHSPVWGTLCLTGHHLILSSRQDNSEE--------LWLLHANIDSI---EKRFVGTSGTITIKS 73

  Fly   130 KDMR--NLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPL 192
            ||:|  .|..:..::..:..:..|.|..    |.....::.|.:.....|..|    ||:::.|.
 Frog    74 KDLRIIQLEISGMEECLNIASSIE
ALST----LDSVTLMYPFFYRPMFEVTEN----GWSLFLPE 130

  Fly   193 AELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRT 257
            .|..:|.:..|.||.:.:|..|::|.|||.:..|||:..||.||:||.||...|.||||:.:.:.
 Frog   131 QEFEQLALETDDWRLSSVNRDYSVCLSYPQLVTVPKSIDDDSLRKVAAFRHAGRFPVLSYYHKKN 195

  Fly   258 QATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDA 322
            ...:.|.||||.|.:|||..:||..::..::...:.   .|:|.|....|...:|:|||:|.|..
 Frog   196 GMVMMRSSQPLTGTNGKRCKEDEKLINATLKHGKRG---YIIDTRALNVAQQARARGGGFEQEAH 257

  Fly   323 YKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDS----KWQTAIDNTLWLKHIRCILAGAVRIV 383
            |.........|...::::|||.|:.|||   .|.|    :|.:.::.:.||.||:.||..|....
 Frog   258 YPQWRRIHKSIERFNILQESLIKLVEAC---NDQSHNMDRWLSKLEASNWLTHIKEILTTACLAA 319

  Fly   384 DKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGD 448
            ..::....||:||.|:|.|.|.|:|:|:.::|||..||:||||.|:|:|||..||.||||.....
 Frog   320 QCIDREGASVLVHGSEGMDSTLQVTSLAQIILDPRCRTIRGFESLVEREWLQGGHPFQQRCAQSA 384

  Fly   449 NKHSDAD-RSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAED 512
            ..:|... .:|.||.|:|.|||:.:||..:|:|||..|||:.:|.|:.:|||||.|.:.||....
 Frog   385 YSNSKQKWEAPTFLLFLDCVWQILRQFPCSFQFNERLLITLYEHAYASQFGTFLGNNDYERNKLK 449

  Fly   513 LKHKTTSLWTHIN--SSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQH 575
            |..||.|||:.:|  |.::::||||:.:  :|  ||:.|..:.:|::||:|::.|||......:.
 Frog   450 LSQKTLSLWSWVNQPSEINKFLNPLYEA--NG--LVIWPSVAPQSLQLWEGVFLRWNRSSKYLEE 510

  Fly   576 GCQRTRELLSKQDQLFKLVNELR 598
            ..:....::....:|...||.||
 Frog   511 AYEEMAHIIEYNKELQVKVNALR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 22/95 (23%)
Myotub-related 184..509 CDD:399535 128/329 (39%)
mtmr9NP_001072833.1 PH-GRAM_MTMR9 1..97 CDD:275398 20/87 (23%)
Myotub-related 108..445 CDD:368997 130/346 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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