DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and Mtmr2

DIOPT Version :10

Sequence 1:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_036011299.1 Gene:Mtmr2 / 77116 MGIID:1924366 Length:718 Species:Mus musculus


Alignment Length:654 Identity:357/654 - (54%)
Similarity:464/654 - (70%) Gaps:52/654 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPSASL----ADKLASKTASSNSLDSSSKSSSLGSKHGGGENGILRDT---------------- 45
            |:.|:|.    |...|::..|.:||.|:|.|.|..|.|....:.|..|:                
Mouse    69 MEKSSSCESLGAQLPAARLPSEDSLSSASTSHSENSVHTKSASAISSDSISTSADNFSPDLRVLR 133

  Fly    46 ----------PFGYLEGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVD 100
                      | ..|.||..:|...||||:||:.|.|.|.||:|:|||||:|:   :::||.|:|
Mouse   134 EANKLAEMEEP-ALLPGENIKDMAKDVTYICPFTGAVRGTLTVTSYRLYFKSM---ERDPPFVLD 194

  Fly   101 VPLGVIARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGR 165
            ..||||:||||||||:||||||||:|..|||:||||||||.:..:||::||.|...|||:|....
Mouse   195 ASLGVISRVEKIGGASSRGENSYGLETVCKDIRNLRFAHKPEGRTRRSIFENLMKYAFPVSNGLP 259

  Fly   166 LFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAA 230
            ||||.:......|      ||.:|:||.|.||.|:||:.||.||:||.|.:||:|||:..||...
Mouse   260 LFAFEYKEVFPEN------GWKLYDPLLEYRRQGIPNESWRITKINERYELCDTYPALLVVPANI 318

  Fly   231 SDDFLRRVAQFRSRCRLPVLSWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDK 295
            .|:.|:|||.||||.|:|||||::|.:|||:||||||:|||||||:.:||.||..||::||||.|
Mouse   319 PDEELKRVASFRSRGRIPVLSWIHPESQATVTRCSQPMVGVSGKRSKEDEKYLQAIMDSNAQSHK 383

  Fly   296 LTIMDARPSANAIANKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQ 360
            :.|.|||||.||:|||||||||||||||:|.|:.||||||||||||||||:||..:||.:::.|.
Mouse   384 IFIFDARPSVNAVANKAKGGGYESEDAYQNAELVFLDIHNIHVMRESLRKLKEIVYPTIEETHWL 448

  Fly   361 TAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGF 425
            :.:::|.||:||:.|||||:||.||||:..||||||||||||||||||:|:||:||.:|||:|||
Mouse   449 SNLESTHWLEHIKLILAGALRIADKVESGKTSVVVHCSDGWDRTAQLTSLAMLMLDGYYRTIRGF 513

  Fly   426 EVLIEKEWLSFGHKFQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQ-------QFNNAFEFNEH 483
            |||:|||||||||:||.|:||||..|:|||||||||||||.|||:::       ||..||||||:
Mouse   514 EVLVEKEWLSFGHRFQLRVGHGDKNHADADRSPVFLQFIDCVWQMTRQFVVLNLQFPTAFEFNEY 578

  Fly   484 FLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLR 548
            |||||:||||||.|||||||:|.:|..|:|..||.|||::|||.|:.:.|||:.|:::.   ||.
Mouse   579 FLITILDHLYSCLFGTFLCNSEQQRGKENLPKKTVSLWSYINSQLEDFTNPLYGSYSNH---VLY 640

  Fly   549 PIASVRSVRLWKGLYCRWNPGLCAPQHGCQRTRELLSKQDQLFKLVNELRLKSNNRSNSMQTTTR 613
            |:||:|.:.||.|.|.||||.:...:....|.:|||:|:.:|.:.|.||:.:.:|||.|  ::.|
Mouse   641 PVASMRHLELWVGYYIRWNPRMKPQEPIHSRYKELLAKRAELQRKVEELQREISNRSTS--SSER 703

  Fly   614 LASP 617
            .:||
Mouse   704 ASSP 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 61/101 (60%)
Myotub-related 184..509 CDD:461958 222/331 (67%)
Mtmr2XP_036011299.1 PH-like 141..255 CDD:473070 67/117 (57%)
Myotub-related 270..603 CDD:461958 223/338 (66%)

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