DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and Mtmr11

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001178025.1 Gene:Mtmr11 / 689613 RGDID:1589965 Length:700 Species:Rattus norvegicus


Alignment Length:672 Identity:157/672 - (23%)
Similarity:245/672 - (36%) Gaps:194/672 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SSNSLDSSSKSSSLGSKHGGGENGILRDTPFGYLEGEEDQDQKNDVTYVCPYRGP---VFGALTI 78
            ||:.|.|...|..|..:|      ||...|     |..              :||   :.|.|..
  Rat    38 SSHQLGSCLASGCLPGEH------ILAWAP-----GRR--------------KGPGLELPGTLIC 77

  Fly    79 TNYRLYFRSLPL---RDQEPPV--VVDVPLGVIARVEKIGGATSRGENSYG---------IEIFC 129
            ||:|:.|:  |.   |:|:.|:  ..|..|..|.|:|.:.|.:.......|         :.|..
  Rat    78 TNFRVTFQ--PCGWQRNQDTPLSSEYDFALINIGRLEAVSGLSRVQLLRPGSQLKFIPEEVLIHG 140

  Fly   130 KDMRNLRFAHKQQN-------------HSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNG 181
            :|.|.||...:...             .:|....:..|.....||.:|::..........:....
  Rat   141 RDFRLLRIGFEAGGLAPQAFQVTMAIIQARAQSSQVQQYRGITLSKAGKVSGSRKPPIPLLETLE 205

  Fly   182 GWDGWAVYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCR 246
            .|:        .|.::.|...  ||.:.:||.:.:..|....:.||....|..:||......:.|
  Rat   206 DWE--------TERKKQGARG--WRVSMVNERFDVATSLSGYFWVPNRILDSEVRRAFAHFHQGR 260

  Fly   247 LPVLSWMNPRTQATITRCSQPLVG--VSGKRNSDDEAYLSFIMEANAQSDKLTI--MDARPSANA 307
            .|.|||.:| ..:.:.||:    |  ::...|.:|...:..:::| ..||.:.:  ||..||   
  Rat   261 GPRLSWHHP-GGSDLLRCA----GFYIASDPNKEDIRAVELMLQA-GHSDVVLVDTMDEMPS--- 316

  Fly   308 IANKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTD--DSKWQTAIDNTLWLK 370
                                  ..|:...|:      |::..|.|.:.  :.||.:|::.|.||.
  Rat   317 ----------------------LADVQLAHL------KLRALCLPDSSVAEDKWLSALEGTRWLD 353

  Fly   371 HIRCILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLS 435
            ::|..|..|..|...|.:...|||:......|....|::|..|||.|..||:.||:.|:::||::
  Rat   354 YVRSCLRKASDISVLVTSRVRSVVLQERGDRDFNGLLSSLVQLLLAPEARTLFGFQSLVQREWVA 418

  Fly   436 FGHKFQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTF 500
            .||.|..|:|    :...::.:||...|:|..||:.|||...|||:|.||:.:.|.:......||
  Rat   419 AGHPFLTRLG----ETGASEEAPVLPLFLDCAWQLLQQFPAEFEFSEFFLLALHDSIRVPDTLTF 479

  Fly   501 LCNTEAER---------------------VAEDLKHKTTSLW----THINSSLDQYLNPLF---- 536
            |.||..||                     :|....:...|:|    .:....:.|:|||.:    
  Rat   480 LRNTPWERGKKSGQFNSYTQVYTPEYSQPLAGSPANLHLSVWDWDLRYSKEQISQFLNPGYDPEH 544

  Fly   537 ------------------PS----FTHGAELVL---------------------RPIASVRSV-- 556
                              ||    |:.||...|                     ||..|..|:  
  Rat   545 CPDSGLPRQQPSLMVPGSPSSMWLFSRGALTPLNQLCPWQDSTSLLTVSSHWLPRPARSSESLAD 609

  Fly   557 RLWKGLYCRWN-----PGLCAP 573
            :.| ||...|.     |||..|
  Rat   610 QEW-GLPSHWGACPLPPGLLLP 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 26/131 (20%)
Myotub-related 184..509 CDD:399535 91/351 (26%)
Mtmr11NP_001178025.1 PH-like 51..165 CDD:302622 30/140 (21%)
PTPc 195..469 CDD:304379 84/324 (26%)
3-PAP 553..683 CDD:289355 18/79 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349534
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.840

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