DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtmr12

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_009299937.1 Gene:mtmr12 / 569130 ZFINID:ZDB-GENE-050401-1 Length:753 Species:Danio rerio


Alignment Length:712 Identity:157/712 - (22%)
Similarity:279/712 - (39%) Gaps:192/712 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NGILRDTPFGYLEGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQE--------- 94
            |.||:.|       ::|..|:.           |||.|..||:|:.|.|.....:|         
Zfish    51 NPILKYT-------QDDLSQRG-----------VFGTLLCTNFRVAFISDDAPQEEMSKTFKNKL 97

  Fly    95 ------PPVVVDVPLGVIARVEK-IGGATSRGENSYGIEIFCKDMRNLRFA---HKQQNHSRRTV 149
                  |.:.||...||.....| |.|...:.:....:.|.|||:|..:|.   .|:::..|  :
Zfish    98 YGENDIPLMCVDHIYGVYDEKRKLITGGLVKNKCPSKMIIHCKDLRVFQFCLTFSKEEDAKR--I 160

  Fly   150 FEKLQANAFPLSYSGRLFAFAH-AAANSVNGNGGWDGWAVYEPLAELRR------LGVPNDMW-- 205
            |:.:..:.........:|||:: .:.|..:|..........:..:|:.|      ...|.| |  
Zfish   161 FQGIAHHCLEEKSLKCVFAFSYLRSTNPDHGKSSRKCITRLDSKSEMLRKREAIMFDSPED-WTQ 224

  Fly   206 --RATKL-------NESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQATI 261
              :.||.       ||::.:....|..:.:|.|..|.|     .::.: .||:..|.: .:...:
Zfish   225 EMKRTKAQCRLVTENENFELSQRLPQYFVIPSALGDLF-----NYQGK-GLPIWCWSH-HSGCAL 282

  Fly   262 TRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKNV 326
            .:.|.|.:   .:.:.|.:::|..::.|.|::...::                   ::||..:: 
Zfish   283 FKASFPSM---TQEDGDFQSHLDTMITAVARNYLYSV-------------------KTEDLSES- 324

  Fly   327 EINFLDIHNIHVMRESLRKVKEACF--PTTD----DSKWQTAIDNTLWLKHIRCILAGAVRIVDK 385
                  :..:..:::|..|.|:...  .|||    |.||.::::::.||..||..|..||.:|:.
Zfish   325 ------LPTLQDIQQSYNKFKQYFLIDNTTDFWLSDVKWFSSLESSGWLDIIRQCLQKAVEVVEC 383

  Fly   386 VETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNK 450
            :|..:|:|::...:|.|....:::|:.::|||:|||:.||:.|::|||::..|.|..|..|...|
Zfish   384 LEKDNTNVLITEEEGTDLCCVISSLAQIMLDPYYRTLMGFQSLVQKEWVAGCHAFLDRCNHLHQK 448

  Fly   451 HSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAER------- 508
            ..:. .|||||.|::.|||:.||.:.||:|:|.:|..:.|.::...|.|||.|:...|       
Zfish   449 DKEC-HSPVFLLFLECVWQLVQQHSPAFQFSETYLTVLSDSVHVPIFSTFLFNSAHHRESVMKAE 512

  Fly   509 ---------------------------------VAEDLKHKTTSLWTHINSSLDQYLNP------ 534
                                             .:|.:||:.|....|.:....|...|      
Zfish   513 SPIAQSRPLSCPTVWDWSVQFDSKAQNFFFNPLYSEKVKHERTVRRPHKHKHQRQLSLPSSAFKT 577

  Fly   535 -----LFPSFTHGAELVLR-------------PIASVR------------------------SVR 557
                 .|...|...:.:||             |:.:.|                        |||
Zfish   578 PTKKGFFKDETDSLKKMLRVKRISRWMGSPDSPVVASREFYESWQQRPLDYHGLLLPSLDGPSVR 642

  Fly   558 LWKGLYCRWNPGLCAPQHGCQRTRELLSKQDQLFKLVNELRLKSNNRSNSMQTTTRLASPMH 619
            :|...|.||.|.:.....|   :..:::|..:|...|.:|:.....|..|:.|......|:|
Zfish   643 IWMQRYLRWIPEVHIMGGG---SVAIMTKLMELLSQVEDLKRVLEQRDPSLATQPDHPPPLH 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 28/120 (23%)
Myotub-related 184..509 CDD:399535 88/387 (23%)
mtmr12XP_009299937.1 PH-like 21..215 CDD:302622 40/183 (22%)
PTPc 221..501 CDD:304379 83/317 (26%)
3-PAP 566..692 CDD:289355 23/128 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590772
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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