DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtmr9

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001038535.1 Gene:mtmr9 / 565063 ZFINID:ZDB-GENE-040724-223 Length:549 Species:Danio rerio


Alignment Length:550 Identity:181/550 - (32%)
Similarity:280/550 - (50%) Gaps:54/550 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVI-ARVEKIGGATSRGENSYG-IEIFC 129
            |:...|.|.|.:|.:.:...|.....:|        |.:: |.::.|   ..|...|.| |.:.|
Zfish    20 PFMPTVEGTLCLTGHHIILSSRQDNTEE--------LWLLHANIDSI---EKRFVGSLGTIIVKC 73

  Fly   130 KDMR--NLRFAHKQQNHSRRTVFEKLQ-----ANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWA 187
            ||:|  .|.....::..:..:..|.|.     :..:|..|. .||....            |||.
Zfish    74 KDLRVIQLDIPGMEECLNIASSVE
ALSTLDSVSLMYPFFYR-PLFEVIE------------DGWQ 125

  Fly   188 VYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSW 252
            ::.|....:.|....|.||.:::|:.:::|.|||::..|||...|:.|.:.|.||...|.||||:
Zfish   126 LFVPEEAFKDLESMTDEWRLSEVNKDFSVCPSYPSLLTVPKDIDDESLIKAASFRHGGRFPVLSY 190

  Fly   253 MNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGY 317
            .:.:....:.|.:|||.|.:|:|..:||..::..:.|..:.   .|:|.|..|.|...||:|||:
Zfish   191 YHKKNGMVMMRAAQPLTGTNGRRCKEDEKLINATLCAGKRG---YIIDTRTIAVAQQAKARGGGF 252

  Fly   318 ESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDS----KWQTAIDNTLWLKHIRCILAG 378
            |.|..|.........|...::::|||.|:.|||   .|.|    :|.:.::.:.|..|::.||..
Zfish   253 EQEANYPQWRRIHKAIERSNILQESLIKLVEAC---NDQSHNMDRWLSKLEASNWQSHVKEILTT 314

  Fly   379 AVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQR 443
            |......::....||:||.|:|.|.|.|:|:|:.::|||..||:||||.|||:|||..||.||||
Zfish   315 ACLAAQCIDREGASVLVHGSEGTDSTLQVTSLAQIILDPACRTIRGFEALIEREWLQAGHPFQQR 379

  Fly   444 IGHGDNKHSDA---DRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTE 505
            .  ..:.:|:.   ..:||||.|:|.|||:.:||..:|:|:|.|||.:.:|.|:.:|||||.|:.
Zfish   380 C--AQSAYSNGKPRSEAPVFLLFLDCVWQILRQFPCSFQFSESFLIMLFEHTYASQFGTFLGNSV 442

  Fly   506 AERVAEDLKHKTTSLWTHIN--SSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNP 568
            |||....|.|||.|||:.:|  ..|::|||||:    ....||:.|..:.:|:.||:|::.|||.
Zfish   443 AERAKLQLSHKTVSLWSWVNRPQELERYLNPLY----EANNLVIWPSVAPQSLLLWEGVFLRWNR 503

  Fly   569 GLCAPQHGCQRTRELLSKQDQLFKLVNELR 598
            .........|....::....:|...||.||
Zfish   504 STKCLDEAYQEMVHIIEYNKELQNKVNSLR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 21/100 (21%)
Myotub-related 184..509 CDD:399535 125/331 (38%)
mtmr9NP_001038535.1 PH-GRAM_MTMR9 1..97 CDD:275398 19/87 (22%)
Myotub-related 108..444 CDD:284109 127/356 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590809
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.850

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