DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtm1

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001032773.2 Gene:mtm1 / 560881 ZFINID:ZDB-GENE-051113-128 Length:639 Species:Danio rerio


Alignment Length:622 Identity:330/622 - (53%)
Similarity:434/622 - (69%) Gaps:37/622 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SASLADKLASKTASSNSLDSSSKSSSLGSKHGGGENGILRDTPFG---YLEGEEDQDQKNDVTYV 65
            ||.:|...:|...:|:|.::|.:|              |:..|..   .|.|||....| |:.|:
Zfish    36 SAPIAPYNSSPLGNSSSQNASRES--------------LKMEPLADVTLLPGEERVIDK-DIIYI 85

  Fly    66 CPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYGIEIFCK 130
            |||...|.|.:.||||||||::   .|.|.||.:::|||||:||||:|||:||||||||:||.||
Zfish    86 CPYNAAVKGKVFITNYRLYFKN---TDSETPVTLNIPLGVISRVEKMGGASSRGENSYGLEITCK 147

  Fly   131 DMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAEL 195
            ||||||||.||:.||||.:||.:...|||||:..:||||........|      ||.|||.|.|.
Zfish   148 DMRNLRFALKQEGHSRRDIFEIIFKYAFPLSHGMQLFAFLSQEKYEEN------GWNVYEALEEY 206

  Fly   196 RRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQAT 260
            ||.|:||:.||.|.:|::|.:||:||.:..||..|::|.||:||.||||||:||:||.:....|.
Zfish   207 RRQGLPNNEWRVTFINKNYELCDTYPTILVVPYKATEDDLRKVATFRSRCRIPVMSWFHKENHAV 271

  Fly   261 ITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKN 325
            ||||||||||:|||||.|||.||..|.|||. :.||||.||||:.||:||||.|||||.:|||:|
Zfish   272 ITRCSQPLVGMSGKRNKDDERYLDLIREANG-TTKLTIYDARPNVNAVANKATGGGYEGDDAYQN 335

  Fly   326 VEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMS 390
            .|:.||||||||||||||:|:|:..:|..::|.|.:::::|.||:||:.:|:||:::.|||.: .
Zfish   336 AELVFLDIHNIHVMRESLKKLKDIVYPNVEESHWLSSLESTHWLEHIKLVLSGAIQVADKVSS-G 399

  Fly   391 TSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDAD 455
            :||:||||||||||||||:||||:||.:|||:|||:||:||||:||||||..||||||..|:|.|
Zfish   400 SSVMVHCSDGWDRTAQLTSLSMLMLDSYYRTLRGFQVLMEKEWISFGHKFASRIGHGDKNHADQD 464

  Fly   456 RSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKTTSL 520
            |||:||||||.|||:::||..||||||..|:.|:||||||||||||.|.|:.|.:.:::.||.||
Zfish   465 RSPIFLQFIDCVWQMTKQFPTAFEFNERLLVVILDHLYSCRFGTFLYNCESVRDSNNVRTKTVSL 529

  Fly   521 WTHINSSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGC--QRTREL 583
            |::|||....|:||.   :|..:..||.|:||:|.:.||...|.||||.:...|...  ||.:||
Zfish   530 WSYINSDTSLYINPF---YTPESSRVLYPVASMRHLELWVTYYIRWNPRIQHQQQSPVEQRYKEL 591

  Fly   584 LSKQDQLFKLVNELRLKSNNRSNSMQT---TTRLASP 617
            |:.:||..|.:.||:|..:..|::..|   |...|:|
Zfish   592 LALRDQYLKKLEELQLSDSAPSSTHLTNSSTPNAATP 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 61/101 (60%)
Myotub-related 184..509 CDD:399535 203/324 (63%)
mtm1NP_001032773.2 PH-like 77..176 CDD:327399 61/102 (60%)
Myotub-related 199..517 CDD:310891 201/319 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590798
Domainoid 1 1.000 469 1.000 Domainoid score I432
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 655 1.000 Inparanoid score I758
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D319276at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 1 1.000 - - otm24644
orthoMCL 1 0.900 - - OOG6_101490
Panther 1 1.100 - - LDO PTHR10807
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X213
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.800

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