DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtm1

DIOPT Version :10

Sequence 1:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001015828.1 Gene:mtm1 / 548545 XenbaseID:XB-GENE-1002030 Length:602 Species:Xenopus tropicalis


Alignment Length:603 Identity:328/603 - (54%)
Similarity:428/603 - (70%) Gaps:23/603 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SSNSLDSSSKSSSLGSKHGGGENGILRDTPFGYLEGEEDQDQKNDVTYVCPYRGPVFGALTITNY 81
            :||||::|.:.|.     |.|.|....| ....|.||.....| ||.|:||:.|||.|.:.:|||
 Frog    10 NSNSLENSLRRSP-----GDGMNHEQND-EIPCLPGEALITDK-DVIYMCPFYGPVKGRIHVTNY 67

  Fly    82 RLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSR 146
            :|||:.   .:.||.:...||||||||:||:|||:||||||||::|.||||||||||.||:.|||
 Frog    68 KLYFKG---EEMEPLISFSVPLGVIARIEKMGGASSRGENSYGLDITCKDMRNLRFALKQEVHSR 129

  Fly   147 RTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLGVPNDMWRATKLN 211
            :.:||.|...|||||:...||||.:......|      |||||:.:.|.||.|:||..||.|.:|
 Frog   130 KQIFEDLTKYAFPLSHGLLLFAFQNEEKFPEN------GWAVYDAMTEFRRQGLPNGQWRITFIN 188

  Fly   212 ESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQATITRCSQPLVGVSGKRN 276
            ::|.:||:||.:..||.:||::.|::||.||||.|:|||||::|..|:.|.||||||||:|||||
 Frog   189 KNYELCDTYPPLLVVPYSASEEDLKKVAAFRSRNRIPVLSWLHPENQSAIMRCSQPLVGMSGKRN 253

  Fly   277 SDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKNVEINFLDIHNIHVMRE 341
            .|||.||..|.:.|.|:.||||.||||:.||:||||.||||||||||.|.|:.||||||||||||
 Frog   254 KDDERYLDIIRDTNGQTSKLTIYDARPNVNAVANKATGGGYESEDAYPNAELVFLDIHNIHVMRE 318

  Fly   342 SLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQ 406
            ||:|:|:..:|..::|.|.:::::|.||:||:.:|.||:::.|||.:..:|||||||||||||||
 Frog   319 SLKKLKDIVYPNVEESHWLSSLESTHWLEHIKLVLTGAIQVADKVASGKSSVVVHCSDGWDRTAQ 383

  Fly   407 LTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDADRSPVFLQFIDSVWQVS 471
            ||:|:||:||.:|||:.|||||::|||:||||||..||||||..|:||||||:||||||.|||:|
 Frog   384 LTSLAMLMLDSYYRTIVGFEVLVQKEWISFGHKFSSRIGHGDKNHADADRSPIFLQFIDCVWQMS 448

  Fly   472 QQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKTTSLWTHINSSLDQYLNPLF 536
            :||..|||||||||||::||||||||||||.|.|..|..|.::.||.|||:.|:|...:|.||. 
 Frog   449 KQFPTAFEFNEHFLITVLDHLYSCRFGTFLYNCENIRDKEKVREKTQSLWSLISSEKSKYTNPF- 512

  Fly   537 PSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGC--QRTRELLSKQDQLFKLVNELRL 599
              :|.....||.|:||:|.:.||...|.||||.:...|...  ||..|||:.:|...:.:.||::
 Frog   513 --YTKELNRVLYPVASMRHLELWVNYYIRWNPRIRQQQPNPVEQRYMELLALRDDYVRRLEELQI 575

  Fly   600 KSNNRSNSMQTTTRLASP 617
            .::.:.||  :||..:||
 Frog   576 TNSPKMNS--STTSPSSP 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 59/101 (58%)
Myotub-related 184..509 CDD:461958 206/324 (64%)
mtm1NP_001015828.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32 9/26 (35%)
PH-like 43..142 CDD:473070 59/102 (58%)
Myotub-related 159..482 CDD:461958 206/328 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..602 6/20 (30%)

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