DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and mtmr1b

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001014352.1 Gene:mtmr1b / 541517 ZFINID:ZDB-GENE-050327-48 Length:649 Species:Danio rerio


Alignment Length:622 Identity:298/622 - (47%)
Similarity:422/622 - (67%) Gaps:40/622 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDPSASLADKLASKTASSNSLDSSSKSSSLGSKHGGGENGILRDTPFGYLEGEEDQDQKNDVTYV 65
            |:....|.|....:||.|::|...:|.:.            :.:.|  .:.||..:....||.|:
Zfish    56 MEVKGFLLDSDPQQTAPSSALREGNKQAQ------------MEEAP--RIPGETIKAIVKDVMYI 106

  Fly    66 CPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYGIEIFCK 130
            ||:.|.:.|.||||:::|||:||   .::.|.|:||.||.::|:|.| ...|.|:::.|:||.||
Zfish   107 CPFSGVIRGTLTITDFKLYFKSL---TRDSPFVLDVNLGAVSRLESI-AVQSHGDDTQGLEIVCK 167

  Fly   131 DMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAEL 195
            |:|..|||:|::..|...:|:.|...|||||::..||||.:......      |||.:|:|:||.
Zfish   168 DLRTPRFAYKKEGQSNLEMFKILSKYAFPLSHNLPLFAFKYRETFPE------DGWKIYDPVAEY 226

  Fly   196 RRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQAT 260
            :|.|:||:.|..:|:|..|.:|::|||:..:|...::|.|:|||.||::.|.|||||::|.:||.
Zfish   227 KRQGLPNESWIISKVNSGYEVCETYPALLVLPSNVTEDELKRVAAFRAKRRFPVLSWIHPESQAA 291

  Fly   261 ITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKN 325
            |.||.||.||.|.:|..:||.||..|::|||||.||.|.|||.|..|..||||.||||:|..|.|
Zfish   292 IVRCGQPQVGPSDRRCREDERYLQTILDANAQSHKLCIFDARQSTVADTNKAKDGGYENESFYIN 356

  Fly   326 VEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMS 390
            ||:|||:|.|||||||||||:||..:|..|...|.:.:|.|.||:::|.:|||||||.|::|:..
Zfish   357 VELNFLEIPNIHVMRESLRKLKEVVYPAIDQQHWFSNVDATHWLEYVRLLLAGAVRIADRIESGK 421

  Fly   391 TSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDAD 455
            ||||||||||||||||||:|:||:||.|||:::||:||:|||||||||:|..|:||||..|::::
Zfish   422 TSVVVHCSDGWDRTAQLTSLAMLMLDAHYRSLKGFQVLLEKEWLSFGHRFASRVGHGDGNHANSE 486

  Fly   456 RSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKTTSL 520
            |||:|:||||.|||:::||.:||||||.||||::|||:||.|||||.|:|.|||::::.:||.||
Zfish   487 RSPLFVQFIDCVWQMTRQFPSAFEFNELFLITVLDHLFSCLFGTFLYNSEQERVSKEVYNKTVSL 551

  Fly   521 WTHINSSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGL--CAPQHGCQRTREL 583
            |:::||.::::.|||:.::.|.   ||.||||:|.:.||...|.||||.:  ..|.|  |..:||
Zfish   552 WSYVNSQIEEFTNPLYVNYEHH---VLYPIASLRHLELWVSYYVRWNPRMRPQVPIH--QSLKEL 611

  Fly   584 LSKQDQLFKLVNELR---LKSNNRSNS------MQTT 611
            |..:.:|.|.|.:|:   ..||:.|:|      ||||
Zfish   612 LVLKSELQKRVEDLKQDAASSNSLSSSEHEGMPMQTT 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 42/101 (42%)
Myotub-related 184..509 CDD:399535 192/324 (59%)
mtmr1bNP_001014352.1 PH-like 97..196 CDD:302622 42/102 (41%)
Myotub-related 203..538 CDD:284109 195/340 (57%)
3-PAP <572..628 CDD:289355 25/60 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590815
Domainoid 1 1.000 469 1.000 Domainoid score I432
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 655 1.000 Inparanoid score I758
OMA 1 1.010 - - QHG58725
OrthoDB 1 1.010 - - D319276at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 1 1.000 - - otm24644
orthoMCL 1 0.900 - - OOG6_101490
Panther 1 1.100 - - O PTHR10807
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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