DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and Mtmr1

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_036017901.1 Gene:Mtmr1 / 53332 MGIID:1858271 Length:704 Species:Mus musculus


Alignment Length:646 Identity:324/646 - (50%)
Similarity:444/646 - (68%) Gaps:47/646 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SASLADKLASKTASSN--------------SLDSSSKSSSLGSKHGG------GENGILRD-TPF 47
            :|:::.:::....|.|              ::..:.:...|..:|.|      .:...||| ...
Mouse    67 AATISSQISGSVTSENVSRDYKVFRRPDTRNIHKARQRLELEEEHNGYPSEAEADQVALRDGNKL 131

  Fly    48 GYLE------GEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVI 106
            ..:|      ||..:....||.|:||:.|.|.|.||:|::::||:::   :::|..|:|||||||
Mouse   132 AQMEEAPLFPGESIKAIVKDVIYICPFMGAVSGTLTVTDFKMYFKNV---ERDPHFVLDVPLGVI 193

  Fly   107 ARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAH 171
            :||||| ||.|.|:||.||||.||||||||.|:||:...:..:||.|..:|||||....||||.:
Mouse   194 SRVEKI-GAQSHGDNSCGIEIVCKDMRNLRLAYKQEEQRKLGIFENLNKHAFPLSNGQVLFAFNY 257

  Fly   172 AAANSVNGNGGWDGWAVYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLR 236
            .....||      ||.||:|::|.:|.|:||:.|:.:|:|.:|..||:|||:..||.:..||.|.
Mouse   258 KEKFPVN------GWKVYDPVSEYKRQGLPNESWKISKINSNYEFCDTYPAIIVVPTSVKDDDLS 316

  Fly   237 RVAQFRSRCRLPVLSWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDA 301
            :||.||::.|:|||||::|.:|||||||||||||.:.||..:||.||..||:|||||.||||.||
Mouse   317 KVAAFRAKGRVPVLSWIHPESQATITRCSQPLVGPNDKRCKEDEKYLQTIMDANAQSHKLTIFDA 381

  Fly   302 RPSANAIANKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNT 366
            |.::.|..|||||||||:|.||.|.|:.||:|||||||||||||:||..:|:.|:|.|.:.:|.|
Mouse   382 RQNSVADTNKAKGGGYENESAYPNAELIFLEIHNIHVMRESLRKLKEIVYPSIDESHWLSNVDGT 446

  Fly   367 LWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEK 431
            .||::||.:|||||||.||:|:..||||:|||||||||:|||:|:||:||.:|||::|||.||||
Mouse   447 HWLEYIRVLLAGAVRIADKIESGKTSVVIHCSDGWDRTSQLTSLAMLMLDSYYRTIKGFEALIEK 511

  Fly   432 EWLSFGHKFQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCR 496
            ||:||||:|..|:||||:.|:||||||:||||||.|||:::||.:||||||.|||||:||||||.
Mouse   512 EWISFGHRFALRVGHGDDNHADADRSPIFLQFIDCVWQMTRQFPSAFEFNELFLITILDHLYSCL 576

  Fly   497 FGTFLCNTEAERVAEDLKHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKG 561
            |||||||.|.:|:.||:...|.|||::|||.||::.||.|.::.:.   ||.|:||:..:.||..
Mouse   577 FGTFLCNCEQQRIKEDVYTNTISLWSYINSQLDEFSNPFFVNYENH---VLYPVASMSHLELWVN 638

  Fly   562 LYCRWNPGLCAPQ---HGCQRTRELLSKQDQLFKLVNELRLKSNNRSNSMQTTTRLASPMH 619
            .|.||||.: .||   |  |..:|||:.:.:|.|.|.:|:.:...|:.| .::.|.:||.|
Mouse   639 YYVRWNPRM-RPQMPIH--QNLKELLAIKAELQKRVEDLQREMATRTIS-SSSERGSSPTH 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 52/101 (51%)
Myotub-related 184..509 CDD:399535 206/324 (64%)
Mtmr1XP_036017901.1 PH-GRAM_MTMR1 146..245 CDD:270165 52/102 (51%)
Myotub-related 262..588 CDD:399535 208/331 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 490 1.000 Domainoid score I371
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 705 1.000 Inparanoid score I654
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58725
OrthoDB 1 1.010 - - D319276at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 1 1.000 - - otm44050
orthoMCL 1 0.900 - - OOG6_101490
Panther 1 1.100 - - O PTHR10807
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.980

Return to query results.
Submit another query.