DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and sbf2

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_009301876.1 Gene:sbf2 / 378456 ZFINID:ZDB-GENE-030911-10 Length:1898 Species:Danio rerio


Alignment Length:816 Identity:184/816 - (22%)
Similarity:303/816 - (37%) Gaps:283/816 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LEGEE----------DQDQKNDVT---YVCPYRGPVFGALTITNYRLYFRSLPLRDQ---EPPVV 98
            |.|||          |.|.:.:.|   ...|:..|..|||.:|.||:.|:..| .|.   |..|:
Zfish   886 LPGEELVSEGLRVVLDPDGREEATGGLLGGPHILPAEGALFLTTYRIVFKGTP-HDPLVGEQAVI 949

  Fly    99 VDVPLGVIARVEKIGGATSRGEN------------------------SYGIEIFCKDMRNLRF-- 137
            ...|:..:.:.:||.......:|                        |..:|||.|.::.:|:  
Zfish   950 RSFPVSTLTKEKKITIQNQLQQNMQEGLQLRSASFQLIKVAFDEEVSSEMVEIFRKHVQRIRYPS 1014

  Fly   138 --------------------AHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGG 182
                                ..|::|...||:.:.:...|..   :|:: .....:....|..|.
Zfish  1015 SIFSTFAFAAGQTAPQLILPKQKERNTGFRTLSKTIVKGAIK---AGKI-TMGRQSTLKKNEKGS 1075

  Fly   183 WDGW-------------------------AVYEPLAE------LRRLGV-----------PNDMW 205
            ...|                         :..|.|.|      .:|||:           ..:.:
Zfish  1076 RMTWHEDDDISISDDGEPPSSNTLKASEKSTMEQLVERACFRDYQRLGLGTISANSTRLKSGEQF 1140

  Fly   206 RATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRC----RLPVLSWMNPRTQATITRC-- 264
            |.|.:|..|::|.|||.:..:|....|..|::|    |||    ||||:.|.:|||:|.:.|.  
Zfish  1141 RVTAVNRLYSLCRSYPGLLVIPHTVQDSSLQKV----SRCYRHNRLPVVCWKHPRTKAVLLRSGG 1201

  Fly   265 --SQPLVGVSGKRNSDDEAYLSFIMEANAQSDKL--TIMDARP------SANAIANKAKGG---- 315
              |:.:||:...:|....|..|....::.:.:|.  .|:.:.|      .:|.:.|::..|    
Zfish  1202 FHSKSVVGLFKSQNPSSAAPTSSDTSSSLEQEKYLQAILSSIPIYFKPNGSNTLTNRSLIGLSPA 1266

  Fly   316 -----------------------------GYESE------------------------------- 320
                                         ||..:                               
Zfish  1267 SERRASRIPKMAPVHLDISFTNSFTRGVLGYRDKLFTHSNQKASAKGRIHNQGVWASLRSSSRFI 1331

  Fly   321 ---------------------------------------------------DAYKNVEINFLDIH 334
                                                               |...|.|:..::..
Zfish  1332 QHPAVGDVGARLAGKDLAPPTGIENLQAQLLKHQAALYIFGEKSHFRGLKLDPALNCELVPVEFA 1396

  Fly   335 NIHVMRESLRKVKEACFPT-----TDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVV 394
            :...::.|.:|:..||.|:     |:|| :..|::.:.|:..|..:|..||..|:.::: .:||:
Zfish  1397 DTRQVKASFKKLLRACAPSAMSSDTEDS-FLKALEESEWMLQIHKLLQLAVVAVELLDS-GSSVL 1459

  Fly   395 VHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDADRSPV 459
            |...:|||.|.|:.:|:.:|.||.|||:.||:||:|||||||||||.|| |:.:.....:..:|:
Zfish  1460 VSLEEGWDITTQVVSLTQVLSDPFYRTLEGFQVLLEKEWLSFGHKFSQR-GNLNPNSQGSGFTPI 1523

  Fly   460 FLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVA-----EDLKHKTTS 519
            ||||:|.|.||..|:...||||:::|..:..|..|.||..||.:::.||:.     ||...|.:.
Zfish  1524 FLQFLDCVHQVHNQYPLEFEFNQYYLKFLAYHYVSNRFKNFLLDSDYERLEHGTLFEDKGEKQSK 1588

  Fly   520 ----LWTHINSSLDQYLNPLFPSFTHG---AELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGC 577
                :|..||..  ....|||.::.:.   .|.||:|:.|:.::..|: .|              
Zfish  1589 RGICIWECINRM--HRKGPLFFNYLYSPSETEPVLKPLISIPNLTTWE-FY-------------- 1636

  Fly   578 QRTRELLSKQDQLFKLVNELRLKSNNRSNSMQTTTR 613
              |.|.||........:..:|.:|...|:::.||.|
Zfish  1637 --TGETLSTGPSYDWCMLTVRSQSMEESDTIATTKR 1670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 30/153 (20%)
Myotub-related 184..509 CDD:399535 119/502 (24%)
sbf2XP_009301876.1 uDENN 1..85 CDD:214824
DENN 121..302 CDD:214823
dDENN 356..424 CDD:129037
SBF2 535..761 CDD:289132
PH-GRAM_MTMR13 889..1007 CDD:275416 27/118 (23%)
Myotub-related 1117..1571 CDD:284109 114/460 (25%)
PH_Sbf1_hMTMR5 1792..1896 CDD:269941
PH 1796..1896 CDD:278594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590760
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.830

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