DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and Mtmr10

DIOPT Version :10

Sequence 1:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001094316.1 Gene:Mtmr10 / 309255 RGDID:1305958 Length:771 Species:Rattus norvegicus


Alignment Length:655 Identity:148/655 - (22%)
Similarity:257/655 - (39%) Gaps:214/655 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VFGALTITNYRL-------------YFRSLPLRDQEPPVVVDVPLGVIARV---------EKIGG 114
            ::|.|..:|:::             ::|:|.|.:.      ||||..|.::         :|:.|
  Rat    64 LWGKLICSNFKISFITDDPMPLQKFHYRNLLLGEH------DVPLTCIEQIVTVNDHKRKQKVLG 122

  Fly   115 ATSRGE-NSYGIEIFCKDMRNLRFAHKQQ-------------NHSRRTVFEKLQANAFPLSYSGR 165
            ...:.: |...:.|:|||.|.:||...:.             ::|:.|..:.|    |...|.|:
  Rat   123 PNQKLKFNPTELIIYCKDFRIVRFRFDESGPESAKKVCLAIAHYSQPTDLQLL----FAFEYVGK 183

  Fly   166 LFAFAHAAANSVNG--NGGWDGWA-----------VYEPLA----ELRRLGVPNDMWRATKLNES 213
            .:   |.:||.|||  :||...|:           ::|..:    |.:|.|...  ||...:||.
  Rat   184 KY---HNSANKVNGVSSGGGGVWSGAGSPSSQRTPLFETYSDWDRETKRTGASG--WRVCSINEG 243

  Fly   214 YAICDSYPAVWAVPKAASDDFLRRVA-QFRSRCRLPVLSWMNPRTQATITRCSQPLVGVSGKRNS 277
            |.|....|..:.||.:.:|..|:..: .|..| |:|...|.:....|.:.               
  Rat   244 YMISTCLPEYFVVPSSLADQDLKIFSPSFVGR-RMPCWCWSHSNGSALVR--------------- 292

  Fly   278 DDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKNVEINFLD--IHNIHVMR 340
                 ::.|.:         ::..|.....|.|.......:..|.||    :.||  :.||..::
  Rat   293 -----MALIKD---------VLQQRKIDQRICNAITKSHPQRSDVYK----SDLDKTLPNIQEIQ 339

  Fly   341 ESLRKVKEAC----FPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDGW 401
            .:..|:|:.|    |..|:: ||.:::::|.||:::|..|..:..:|..:|:...|||:...:|.
  Rat   340 AAFVKLKQLCVNEPFEETEE-KWLSSLESTRWLEYVRAFLKHSAELVYILESQRLSVVLQEEEGR 403

  Fly   402 DRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDADRSPVFLQFIDS 466
            |.:..:.:|..:::||::||:.||:.|::|||:..|:.|..|..|  .|.|:.: ||:||.|:|:
  Rat   404 DLSCLVASLVQVMMDPYFRTITGFQSLVQKEWVMAGYPFLDRCNH--LKRSEKE-SPLFLLFLDT 465

  Fly   467 VWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKH--------------KT 517
            .||:.:|:..||||:|.:|..:.|......|||||.|:..:||.:..:.              |.
  Rat   466 TWQLLEQYPAAFEFSETYLAVLCDSTRISLFGTFLFNSPHQRVKQSTEFAISKNIQLGDEKGLKF 530

  Fly   518 TSLWT-----------------HI----------------------------------------- 524
            .|:|.                 :|                                         
  Rat   531 PSVWDWSLQFTAKDRTLFHNPYYIGKSTPCIQNGSRKSFKRTKKSYSSTLRGMPSCLKNGLISDQ 595

  Fly   525 ------------------------NSSLDQYLNPLF--PSFTHGAELVLRPIASVRSVRLWKGLY 563
                                    :|..:||....|  |:..||   ::.|..|...::|||..|
  Rat   596 ELLPRRNSLILKLKPDPPQHGDSQHSGAEQYFKEWFSRPANLHG---IILPRLSGTHIKLWKLCY 657

  Fly   564 CRWNP 568
            .||.|
  Rat   658 FRWVP 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 24/122 (20%)
Myotub-related 184..509 CDD:461958 91/346 (26%)
Mtmr10NP_001094316.1 PH-GRAM_MTMR10 21..193 CDD:270154 30/141 (21%)
PTP-MTMR10 275..468 CDD:350441 58/230 (25%)
3-PAP 570..701 CDD:463634 16/96 (17%)

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