DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and Mtmr7

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_038950456.1 Gene:Mtmr7 / 306490 RGDID:1306608 Length:672 Species:Rattus norvegicus


Alignment Length:511 Identity:202/511 - (39%)
Similarity:293/511 - (57%) Gaps:49/511 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWD------G 185
            |.||:.:.::....|:... ..|:..|...|.|:.|. .|:.|:.        |...|      |
  Rat    84 IRCKNFQIVQLVIPQERDC-HDVYVSLIRLARP
VRYE-ELYCFSF--------NPKLDKEEREQG 138

  Fly   186 WAVYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVL 250
            |.:.:...|.:|:|:|::.|:.:.:|..|.:|||||....||::|:...:...::||||.|.|.|
  Rat   139 WLLVDLSEEYKRMGLPDNYWQLSDVNRDYRVCDSYPTELYVPRSATAHIIVGSSKFRSRRRFPAL 203

  Fly   251 SWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGG 315
            |:....:.|:|.|.||||.|.|. |..:||..|..|.:||.:||.:.::|.||..||:||:|.|.
  Rat   204 SYYCKESHASICRSSQPLSGFSA-RCLEDEQMLQAIRKANPRSDFIYVVDTRPKLNAMANRAAGK 267

  Fly   316 GYESEDAYKNVEINFLDIHNIHVMRESLRKVKEAC---FPTTDDSKWQTAIDNTLWLKHIRCILA 377
            |||:||.|.|::..|:.|.||||||.||:|:.|.|   .|:..|..|  .::|:.||:||:.|:.
  Rat   268 GYENEDNYSNIKFQFIGIENIHVMRNSLQKMLEVCELKSPSMSDFLW--GLENSGWLRHIKAIMD 330

  Fly   378 GAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQ 442
            ..:.|...|....|||:||||||||||||:.:::.|||||:|||::||.|||||:|:||||||..
  Rat   331 AGIFIAKAVSEEGTSVLVHCSDGWDRTAQVCSVASLLLDPYYRTLKGFMVLIEKDWISFGHKFNH 395

  Fly   443 RIGH--GDNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTE 505
            |.|:  ||.|    :.|||..|||:.|||:.:||..||||||.|||.|..|:|||:||.||||::
  Rat   396 RYGNLDGDPK----EISPVIDQFIECVWQLMEQFPCAFEFNERFLIHIQHHVYSCQFGNFLCNSQ 456

  Fly   506 AERVAEDLKHKTTSLWTHINSSLDQYLNPLF---PSFTHGAELVLRPIASVR-SVRLWKGLYCRW 566
            .||....::.:|.|||:::..:...||||||   .|.|.|:  :..|.|... :.:.|.|:|.|:
  Rat   457 KERRELKIQERTYSLWSNLWKNRADYLNPLFRADHSQTQGS--LHLPTAPYNFTYKFWNGMYNRF 519

  Fly   567 NPGL-----------CAPQHGCQRTRELLSKQDQLFKL----VNELRLKSNNRSNS 607
            ..||           ...:...|...||.|.:::|.|:    :|..::||.....|
  Rat   520 EKGLQPRQSVTDYLMAVKEESQQLEEELESLEERLEKIQKVHLNGAKVKSKQSEPS 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 7/31 (23%)
Myotub-related 184..509 CDD:399535 158/335 (47%)
Mtmr7XP_038950456.1 PH-like 21..115 CDD:418428 7/31 (23%)
PTP-MTMR7 144..445 CDD:350431 145/307 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349496
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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