DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and Mtmr9

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001005761.1 Gene:Mtmr9 / 282584 RGDID:628840 Length:549 Species:Rattus norvegicus


Alignment Length:539 Identity:181/539 - (33%)
Similarity:268/539 - (49%) Gaps:32/539 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYG-IEIFCK 130
            |:...|.|.|.:|.:.|...|.....:|        |.::.  ..|.....|...|.| |.|.||
  Rat    20 PFYPAVEGTLCLTGHHLILSSRQDNTEE--------LWLLH--SNIDAIDKRFVGSLGTIIIKCK 74

  Fly   131 DMR--NLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLA 193
            |.|  .|.....::..:..:..|.|..    |.....::.|.:.....|..    |||..:.|..
  Rat    75 DFRIIQLDIPGMEECLNIASSIE
ALST----LDSVTLMYPFFYRPMFEVIE----DGWHSFLPEQ 131

  Fly   194 ELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQ 258
            |..........||.:.:|:.::||.:||....|||:..|:.||:||.||...|.||||:.:.:..
  Rat   132 EFEFYSSATSEWRLSYVNKEFSICPTYPPTVIVPKSIDDEALRKVAAFRHGGRFPVLSYYHKKNG 196

  Fly   259 ATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAY 323
            ..|.|..|||.|.:|:|..:||..::..:.|..:.   .::|.|....|...:|||||:|.|..|
  Rat   197 MVIMRSGQPLTGTNGRRCKEDEKLINATLRAGKRG---YLIDTRSLNVAQQARAKGGGFEQEAHY 258

  Fly   324 KNVEINFLDIHNIHVMRESLRKVKEACFPTTDD-SKWQTAIDNTLWLKHIRCILAGAVRIVDKVE 387
            .........|...||::|||.|:.|||...|.. .:|...::.:.||.||:.||..|......::
  Rat   259 PQWRRIHKSIERYHVLQESLIKLVEACNEQTHSMDRWLGKLEASNWLTHIKEILTTACLAAQCID 323

  Fly   388 TMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHS 452
            ....||::|.::|.|.|.|:|:|:.::|:|..||:||||.|||:|||..||.||||........|
  Rat   324 REGASVLIHGTEGTDSTLQVTSLAQIILEPRSRTIRGFEALIEREWLQAGHPFQQRCAQSAYCSS 388

  Fly   453 DAD-RSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHK 516
            ... .:||||.|:|.|||:.:||..:|||||||||.:.:|.|:.:|||||.|:|.||....|:.|
  Rat   389 KQKWEAPVFLLFLDCVWQILRQFPCSFEFNEHFLIMLFEHAYASQFGTFLGNSENERCKLKLQQK 453

  Fly   517 TTSLWTHIN--SSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGCQR 579
            |.|||:.:|  |.|.::.||||    ....||:.|..:.:|::||:|::.||:..........:.
  Rat   454 TMSLWSWVNRPSELSKFTNPLF----EANNLVIWPSVAPQSLQLWEGIFLRWSRSSKYLDEAYEE 514

  Fly   580 TRELLSKQDQLFKLVNELR 598
            ...::....:|...||.||
  Rat   515 MVNIIEYNKELQAKVNVLR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 22/94 (23%)
Myotub-related 184..509 CDD:399535 128/326 (39%)
Mtmr9NP_001005761.1 PH-GRAM_MTMR9 1..97 CDD:275398 20/86 (23%)
Myotub-related 121..446 CDD:399535 128/331 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349532
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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