DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and Mtmr9

DIOPT Version :10

Sequence 1:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001005761.1 Gene:Mtmr9 / 282584 RGDID:628840 Length:549 Species:Rattus norvegicus


Alignment Length:539 Identity:181/539 - (33%)
Similarity:268/539 - (49%) Gaps:32/539 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYG-IEIFCK 130
            |:...|.|.|.:|.:.|...|.....:|        |.::.  ..|.....|...|.| |.|.||
  Rat    20 PFYPAVEGTLCLTGHHLILSSRQDNTEE--------LWLLH--SNIDAIDKRFVGSLGTIIIKCK 74

  Fly   131 DMR--NLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLA 193
            |.|  .|.....::..:..:..|.|..    |.....::.|.:.....|..    |||..:.|..
  Rat    75 DFRIIQLDIPGMEECLNIASSIE
ALST----LDSVTLMYPFFYRPMFEVIE----DGWHSFLPEQ 131

  Fly   194 ELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQ 258
            |..........||.:.:|:.::||.:||....|||:..|:.||:||.||...|.||||:.:.:..
  Rat   132 EFEFYSSATSEWRLSYVNKEFSICPTYPPTVIVPKSIDDEALRKVAAFRHGGRFPVLSYYHKKNG 196

  Fly   259 ATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAY 323
            ..|.|..|||.|.:|:|..:||..::..:.|..:.   .::|.|....|...:|||||:|.|..|
  Rat   197 MVIMRSGQPLTGTNGRRCKEDEKLINATLRAGKRG---YLIDTRSLNVAQQARAKGGGFEQEAHY 258

  Fly   324 KNVEINFLDIHNIHVMRESLRKVKEACFPTTDD-SKWQTAIDNTLWLKHIRCILAGAVRIVDKVE 387
            .........|...||::|||.|:.|||...|.. .:|...::.:.||.||:.||..|......::
  Rat   259 PQWRRIHKSIERYHVLQESLIKLVEACNEQTHSMDRWLGKLEASNWLTHIKEILTTACLAAQCID 323

  Fly   388 TMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHS 452
            ....||::|.::|.|.|.|:|:|:.::|:|..||:||||.|||:|||..||.||||........|
  Rat   324 REGASVLIHGTEGTDSTLQVTSLAQIILEPRSRTIRGFEALIEREWLQAGHPFQQRCAQSAYCSS 388

  Fly   453 DAD-RSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHK 516
            ... .:||||.|:|.|||:.:||..:|||||||||.:.:|.|:.:|||||.|:|.||....|:.|
  Rat   389 KQKWEAPVFLLFLDCVWQILRQFPCSFEFNEHFLIMLFEHAYASQFGTFLGNSENERCKLKLQQK 453

  Fly   517 TTSLWTHIN--SSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGCQR 579
            |.|||:.:|  |.|.::.||||    ....||:.|..:.:|::||:|::.||:..........:.
  Rat   454 TMSLWSWVNRPSELSKFTNPLF----EANNLVIWPSVAPQSLQLWEGIFLRWSRSSKYLDEAYEE 514

  Fly   580 TRELLSKQDQLFKLVNELR 598
            ...::....:|...||.||
  Rat   515 MVNIIEYNKELQAKVNVLR 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 22/94 (23%)
Myotub-related 184..509 CDD:461958 128/326 (39%)
Mtmr9NP_001005761.1 PH-GRAM_MTMR9 1..97 CDD:275398 20/86 (23%)
Myotub-related 121..446 CDD:461958 128/331 (39%)

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