DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and Mtmr6

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_017171460.1 Gene:Mtmr6 / 219135 MGIID:2145637 Length:655 Species:Mus musculus


Alignment Length:552 Identity:198/552 - (35%)
Similarity:288/552 - (52%) Gaps:67/552 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGR---LF 167
            ||.|||:...||    ...:.|.||:.|.:.|...::..........||     ||...:   |:
Mouse    53 IASVEKLALTTS----GCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQ-----LSKQAKYEDLY 108

  Fly   168 AFAHAAANSVNGNGGWDGWAVYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASD 232
            ||::....  |.....:||.:.:..||..|:||||..|:.:..|..|.:|::||....||:.||.
Mouse   109 AFSYNPKQ--NDTERRNGWQLIDLAAEYERMGVPNANWQLSDANREYKVCETYPRELYVPRTASR 171

  Fly   233 DFLRRVAQFRSRCRLPVLSWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLT 297
            ..:...:.|||:.||||||:....|:|.|.||||||.|.|. |..:||..|..|.:||..:..:.
Mouse   172 PVIVGSSNFRSKGRLPVLSYCRQGTEAAICRCSQPLSGFSA-RCLEDEHLLQAISKANPGNRYMY 235

  Fly   298 IMDARPS--------------------------------------ANAIANKAKGGGYESEDAYK 324
            ::|.||.                                      .|||||:|.|.|||:||.|.
Mouse   236 VVDTRPKHRMQSWWDTQKDIGRIIVRISSKIWNDEKIRESDERKRLNAIANRAAGKGYENEDNYS 300

  Fly   325 NVEINFLDIHNIHVMRESLRKVKEACFPTTDDSK------WQTAIDNTLWLKHIRCILAGAVRIV 383
            |:...|:.|.||||||.||:|:.|     .:.||      :.:.::::.||:||:.:|..|:.:.
Mouse   301 NIRFQFVGIENIHVMRSSLQKLLE-----VNGSKGLSVNDFYSGLESSGWLRHIKAVLDAAIFLA 360

  Fly   384 DKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGD 448
            ..:...:.||:||||||||||:|:.:|..||||.:|||::||.|||||:|:||||||.:|.||.|
Mouse   361 KAIVVENASVLVHCSDGWDRTSQVCSLGSLLLDSYYRTMKGFMVLIEKDWISFGHKFSERCGHLD 425

  Fly   449 NKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDL 513
            ....:.  ||||.||::.||.::|||..||||||.||:.|.:|::||:||.||.|.:.||....|
Mouse   426 GDPREV--SPVFTQFLECVWHLTQQFPQAFEFNEAFLLQIHEHIHSCQFGNFLGNCQKEREELRL 488

  Fly   514 KHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGCQ 578
            |.||.|||..:.....:|||||:.|.:... .||.|..:..:.:.|:.:|.:::..|...|....
Mouse   489 KEKTYSLWPFLLDDKKKYLNPLYSSKSQRL-TVLEPNTASFNFKFWRNMYHQFDRTLHPRQSVLS 552

  Fly   579 RTRELLSKQDQLFKLVNELRLKSNNRSNSMQT 610
            ....:..:..||.:.:.:|..|.....|.:.|
Mouse   553 IIMNMNEQSKQLEEDIKDLEAKIKQCKNGILT 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 14/52 (27%)
Myotub-related 184..509 CDD:399535 151/368 (41%)
Mtmr6XP_017171460.1 PH-GRAM_MTMR6 1..101 CDD:270151 16/56 (29%)
PTP_DSP_cys 130..469 CDD:391942 141/346 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846011
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.880

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