DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and Mtm1

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001157662.1 Gene:Mtm1 / 17772 MGIID:1099452 Length:603 Species:Mus musculus


Alignment Length:616 Identity:327/616 - (53%)
Similarity:437/616 - (70%) Gaps:29/616 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LASKTAS---SNSLDSSS-KSSSLGSKHGGGENGILRDT--PFGYLEGEEDQDQKNDVTYVCPYR 69
            :||.:||   |:||::.| |..|        ::|:.:|.  ....|.||....:| :|.|:||:.
Mouse     1 MASASASKYNSHSLENESIKKVS--------QDGVSQDVSETVPRLPGELLITEK-EVIYICPFN 56

  Fly    70 GPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYGIEIFCKDMRN 134
            ||:.|.:.|||||||.|||   :.:..:::|||||||:|:||:||||||||||||::|.|||:||
Mouse    57 GPIKGRVYITNYRLYLRSL---ETDSALILDVPLGVISRIEKMGGATSRGENSYGLDITCKDLRN 118

  Fly   135 LRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLG 199
            ||||.||:.||||.:||.|..:||||:::..||||.:....:|      |||.||.|:.|.||.|
Mouse   119 LRFALKQEGHSRRDMFEILVKHAFPLAHNLPLFAFVNEEKFNV------DGWTVYNPVEEYRRQG 177

  Fly   200 VPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQATITRC 264
            :||..||.:.:|:.|.:|::|||:..||...|||.|||:|.||||.|||||||::|..:..|.||
Mouse   178 LPNHHWRISFINKCYELCETYPALLVVPYRTSDDDLRRIATFRSRNRLPVLSWIHPENKMVIMRC 242

  Fly   265 SQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKNVEIN 329
            ||||||:|||||.|||.||..|.|.|.|:.||.|.|||||.||:||||.||||||:|||:|.|::
Mouse   243 SQPLVGMSGKRNKDDEKYLDVIRETNKQTSKLMIYDARPSVNAVANKATGGGYESDDAYQNSELS 307

  Fly   330 FLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVV 394
            ||||||||||||||:|||:..:|..::|.|.:::::|.||:||:.:|.||:::.|:|.:..:||:
Mouse   308 FLDIHNIHVMRESLKKVKDIVYPNIEESHWLSSLESTHWLEHIKLVLTGAIQVADQVSSGKSSVL 372

  Fly   395 VHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDADRSPV 459
            ||||||||||||||:|:||:||..|||:.|||:|::|||:||||||..||||||..|:||||||:
Mouse   373 VHCSDGWDRTAQLTSLAMLMLDSFYRTIEGFEILVQKEWISFGHKFASRIGHGDKNHADADRSPI 437

  Fly   460 FLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKTTSLWTHI 524
            ||||||.|||:|:||..||||||.||||::||||||||||||.|.::.|..:.|..:|.|||:.|
Mouse   438 FLQFIDCVWQMSKQFPTAFEFNEGFLITVLDHLYSCRFGTFLFNCDSARERQKLTERTVSLWSLI 502

  Fly   525 NSSLDQYLNPLFPSFTHGAELVLRPIASVRSVRLWKGLYCRWNPGLCAPQHGC--QRTRELLSKQ 587
            ||:.|::.||.   :|.....||.|:||:|.:.||...|.||||.:...|...  ||..|||:.:
Mouse   503 NSNKDKFKNPF---YTKEINRVLYPVASMRHLELWVNYYIRWNPRVKQQQPNPVEQRYMELLALR 564

  Fly   588 DQLFKLVNELRLKSNNRSNSMQTTTRLASPM 618
            |...|.:.||:|.::.:......:|..:|.|
Mouse   565 DDYIKRLEELQLANSAKLADAPASTSSSSQM 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 60/101 (59%)
Myotub-related 184..509 CDD:399535 204/324 (63%)
Mtm1NP_001157662.1 PH-like 44..143 CDD:302622 60/102 (59%)
Myotub-related 150..483 CDD:284109 209/338 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 490 1.000 Domainoid score I371
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 705 1.000 Inparanoid score I654
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D319276at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 1 1.000 - - otm44050
orthoMCL 1 0.900 - - OOG6_101490
Panther 1 1.100 - - LDO PTHR10807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

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