DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and mtm-6

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_871680.1 Gene:mtm-6 / 176757 WormBaseID:WBGene00003478 Length:782 Species:Caenorhabditis elegans


Alignment Length:637 Identity:218/637 - (34%)
Similarity:330/637 - (51%) Gaps:84/637 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LADKLASKTASSNSLDSSSKSSSLGSKHGGGENGILRDTPFGYLEGEEDQDQKNDVTYVC----- 66
            |.||:      :..:||.....|:.|..|.||:|.:...                |..||     
 Worm    84 LKDKI------NGLVDSLMGRESVHSGCGYGEDGRIAMM----------------VDKVCLVDRL 126

  Fly    67 PYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATSRGENSYGIEIFCKD 131
            ..:..:.|.:.:|...:.||:     :.....:.:..|:|:.||| |..|:.|         |  
 Worm   127 GCQENLVGTVHVTTTHIIFRA-----ENGSKELWLATGLISSVEK-GTLTAAG---------C-- 174

  Fly   132 MRNLRFAHKQ-------QNHSRRTVFEKLQANAFPLSYS-GRLFAFAH-AAANSVNGNGGWDGWA 187
            |..:|..|.|       ::.|.:.::|.||..|.|:|.: ..|.||.: .....|.      ||.
 Worm   175 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVNVTELLAFENREPVEDVR------GWR 233

  Fly   188 VYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSW 252
            ..:..:|:.|.|:....|..:.:||.|.|||:||.....|.|||...|....:||||.|||||::
 Worm   234 RLDWNSEMTRQGITKSQWTESNINEGYTICDTYPNKLWFPTAASTSVLLGSCKFRSRGRLPVLTY 298

  Fly   253 MNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGY 317
            .:.:|:|.:.||:|||.|.|. |..:||..:..:.:||..||.|.::|.||..||:.||.:|.|:
 Worm   299 FHQQTEAALCRCAQPLTGFSA-RCVEDEKLMELVGKANTNSDNLFLVDTRPRVNAMVNKVQGKGF 362

  Fly   318 ESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRCILAGAVRI 382
            |.|..|.|:..:|.||.||||||.|..::.:|.....|.:::...::.:.||||:|.::..::.:
 Worm   363 EDERNYSNMRFHFFDIENIHVMRASQARLLDAVTKCRDVTEYWKTLEASGWLKHVRSVVECSLFL 427

  Fly   383 VDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHG 447
            .:.: :..||.|||||||||||:|:.||..|||||:|||:.||:|||||:||.|||||..|.||.
 Worm   428 AESI-SRGTSCVVHCSDGWDRTSQVVALCQLLLDPYYRTIHGFQVLIEKDWLGFGHKFDDRCGHV 491

  Fly   448 DNKHSDADR--SPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVA 510
            ...:.:|.:  ||:|.|::|.:||:.||...||:|||.:||.:.:|:|||:||||:.|.:.:|..
 Worm   492 GALNDEAGKEVSPIFTQWLDCIWQIMQQKPRAFQFNERYLIEMHEHVYSCQFGTFIGNCDKDRRD 556

  Fly   511 EDLKHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLRPIASVRSVR--LWKGLYCRWNPGL--- 570
            .:|..:|.||||.:::..|.|:||.:....|.|.|.|    ..|:.|  :|..:|.|::.||   
 Worm   557 LNLSKRTKSLWTWMDARHDDYMNPFYSPTAHVALLDL----DTRAARFTVWTAMYNRFDNGLQPR 617

  Fly   571 --------CAPQHGCQRTRELLSKQDQLFKLVNELRLKSNNRSNSMQTTTRL 614
                    .|.:|    ...|.|...||...:.||:.:.|.:..|..|.|.:
 Worm   618 ERLEDLTMAAMEH----VGVLESHVAQLRTRLAELKTQQNQQITSTNTPTNM 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 25/113 (22%)
Myotub-related 184..509 CDD:399535 142/326 (44%)
mtm-6NP_871680.1 PH-like 117..209 CDD:388408 25/108 (23%)
PTP-MTMR6-like 237..540 CDD:350380 132/304 (43%)
FYVE 724..782 CDD:214499
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D824298at2759
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.950

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