DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and mtm-1

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_491531.2 Gene:mtm-1 / 172148 WormBaseID:WBGene00003475 Length:588 Species:Caenorhabditis elegans


Alignment Length:552 Identity:238/552 - (43%)
Similarity:346/552 - (62%) Gaps:26/552 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATS----R 118
            :|| |||..|. |...|.:.||.||:.|.............:|:|||.::|:||:|..|:    |
 Worm    38 EKN-VTYFGPL-GKFPGKIVITRYRMVFLVGDGGKMYEQWKLDIPLGQVSRIEKVGRKTTSVAKR 100

  Fly   119 GENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGW 183
            |:::||..|:|||.|..||.....:..|:.|.:.|...|||||::..:||..|||.......   
 Worm   101 GDDNYGFTIYCKDYRVYRFTCNPASSDRKNVCDSLNRYAFPLSHNLPMFASVHAAETPRLMK--- 162

  Fly   184 DGWAVYEPLAELRRLGVPND-MWRATKLNESYAICDSYPAVWAVPKAASDD---FLRRVAQFRSR 244
            |||.:|....|..|||:||. :|:...:|:.|...::||..:.:|..:.::   |::::.:|||:
 Worm   163 DGWKIYSAEKEYERLGIPNSRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSK 227

  Fly   245 CRLPVLSWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIA 309
            .|:|||||:|..|.|:|:|||||:.|:||||:::||.:|:.||.|||...:|.|:||||:.||..
 Worm   228 ERIPVLSWINQTTLASISRCSQPMTGISGKRSAEDERHLTNIMNANANCRELLILDARPAVNAKL 292

  Fly   310 NKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRC 374
            ||||||||  |:.|.|..:.||:||||||:|:||:::..|..|..|:..:..|:|.:.||.|::.
 Worm   293 NKAKGGGY--EENYVNAPLTFLNIHNIHVVRDSLKRLLAALIPRVDEKGYYKALDESKWLNHVQS 355

  Fly   375 ILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHK 439
            ||.|||:.|..|:|...||::|||||||||||||:|:|:.||.:|||:.||.|||||||.|||||
 Worm   356 ILEGAVKAVFNVDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIEKEWCSFGHK 420

  Fly   440 FQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNT 504
            |.:||||||:.:||.:|||||:||.|.:||:.:||..||||.:..||.::|.||:||:||||.|:
 Worm   421 FGERIGHGDDNYSDGERSPVFVQFCDCLWQIMRQFPWAFEFTQELLICMLDELYACRYGTFLYNS 485

  Fly   505 EAERVAEDLKHKTT-SLWTHINSSLDQYLNPLFPSFTHG-AELVLRPIASVRSVRLWKGLYCRWN 567
            |..|:.:....:|| |.|:::..:..::.||:   |.|| :..|:....|:..:.:|...|.|.|
 Worm   486 EKIRLKDKKCDETTISFWSYVLENKKKFRNPM---FKHGKSNKVINVNPSLCGLHVWIDYYARSN 547

  Fly   568 PGLCAPQH------GCQRTRELLSKQDQLFKL 593
            |.:..|.|      |.|...|.....|::..|
 Worm   548 PYVVTPNHEDVQQPGAQFVDEKKQLLDEIMAL 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 37/104 (36%)
Myotub-related 184..509 CDD:399535 168/328 (51%)
mtm-1NP_491531.2 PH-GRAM_MTM-like 36..141 CDD:275407 37/104 (36%)
Myotub-related 148..487 CDD:284109 172/343 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 364 1.000 Domainoid score I489
eggNOG 1 0.900 - - E1_KOG4471
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 449 1.000 Inparanoid score I904
Isobase 1 0.950 - 0 Normalized mean entropy S1356
OMA 1 1.010 - - QHG58725
OrthoDB 1 1.010 - - D319276at33208
OrthoFinder 1 1.000 - - FOG0000303
OrthoInspector 1 1.000 - - oto17788
orthoMCL 1 0.900 - - OOG6_101490
Panther 1 1.100 - - LDO PTHR10807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1956
SonicParanoid 1 1.000 - - X213
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.820

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