DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtm and mtm-1

DIOPT Version :10

Sequence 1:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_491531.2 Gene:mtm-1 / 172148 WormBaseID:WBGene00003475 Length:588 Species:Caenorhabditis elegans


Alignment Length:552 Identity:238/552 - (43%)
Similarity:346/552 - (62%) Gaps:26/552 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 QKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGGATS----R 118
            :|| |||..|. |...|.:.||.||:.|.............:|:|||.::|:||:|..|:    |
 Worm    38 EKN-VTYFGPL-GKFPGKIVITRYRMVFLVGDGGKMYEQWKLDIPLGQVSRIEKVGRKTTSVAKR 100

  Fly   119 GENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNGNGGW 183
            |:::||..|:|||.|..||.....:..|:.|.:.|...|||||::..:||..|||.......   
 Worm   101 GDDNYGFTIYCKDYRVYRFTCNPASSDRKNVCDSLNRYAFPLSHNLPMFASVHAAETPRLMK--- 162

  Fly   184 DGWAVYEPLAELRRLGVPND-MWRATKLNESYAICDSYPAVWAVPKAASDD---FLRRVAQFRSR 244
            |||.:|....|..|||:||. :|:...:|:.|...::||..:.:|..:.::   |::::.:|||:
 Worm   163 DGWKIYSAEKEYERLGIPNSRLWKEVDINKDYKFSETYPRTFVIPTVSWEEGKPFVKKLGEFRSK 227

  Fly   245 CRLPVLSWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIA 309
            .|:|||||:|..|.|:|:|||||:.|:||||:::||.:|:.||.|||...:|.|:||||:.||..
 Worm   228 ERIPVLSWINQTTLASISRCSQPMTGISGKRSAEDERHLTNIMNANANCRELLILDARPAVNAKL 292

  Fly   310 NKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRC 374
            ||||||||  |:.|.|..:.||:||||||:|:||:::..|..|..|:..:..|:|.:.||.|::.
 Worm   293 NKAKGGGY--EENYVNAPLTFLNIHNIHVVRDSLKRLLAALIPRVDEKGYYKALDESKWLNHVQS 355

  Fly   375 ILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHK 439
            ||.|||:.|..|:|...||::|||||||||||||:|:|:.||.:|||:.||.|||||||.|||||
 Worm   356 ILEGAVKAVFNVDTEKQSVLIHCSDGWDRTAQLTSLAMIQLDSYYRTIEGFIVLIEKEWCSFGHK 420

  Fly   440 FQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNT 504
            |.:||||||:.:||.:|||||:||.|.:||:.:||..||||.:..||.::|.||:||:||||.|:
 Worm   421 FGERIGHGDDNYSDGERSPVFVQFCDCLWQIMRQFPWAFEFTQELLICMLDELYACRYGTFLYNS 485

  Fly   505 EAERVAEDLKHKTT-SLWTHINSSLDQYLNPLFPSFTHG-AELVLRPIASVRSVRLWKGLYCRWN 567
            |..|:.:....:|| |.|:::..:..::.||:   |.|| :..|:....|:..:.:|...|.|.|
 Worm   486 EKIRLKDKKCDETTISFWSYVLENKKKFRNPM---FKHGKSNKVINVNPSLCGLHVWIDYYARSN 547

  Fly   568 PGLCAPQH------GCQRTRELLSKQDQLFKL 593
            |.:..|.|      |.|...|.....|::..|
 Worm   548 PYVVTPNHEDVQQPGAQFVDEKKQLLDEIMAL 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 37/104 (36%)
Myotub-related 184..509 CDD:461958 168/328 (51%)
mtm-1NP_491531.2 PH-GRAM_MTM-like 36..141 CDD:275407 37/104 (36%)
Myotub-related 163..489 CDD:461958 168/327 (51%)

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