DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtmr11

DIOPT Version :9

Sequence 1:NP_001285651.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_001313370.1 Gene:mtmr11 / 101882209 ZFINID:ZDB-GENE-130530-726 Length:814 Species:Danio rerio


Alignment Length:526 Identity:129/526 - (24%)
Similarity:222/526 - (42%) Gaps:117/526 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 GPVFGALTITNYRLYFRSLPLRDQEP-----PVVV---DVPLGVIARVEKIGGATSR-------- 118
            |.:.|.|..|::|:.|  :|...|:|     ||::   ||.|..|.:|..:|.:.::        
Zfish    64 GWLSGTLFCTHFRVAF--VPQDSQKPDDNADPVLLGDHDVALASIEKVVAVGPSRTKLVTPTCSL 126

  Fly   119 ---GENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKL--QANAFPLSYS----------GRLFA 168
               .|.   :.::|:|:|.|.|           :|::|  ...|..::|:          |.:.:
Zfish   127 KFTPEE---LVLYCRDLRVLCF-----------LFDRLTPDTQAVEITYTIAKTYQPLKPGTILS 177

  Fly   169 FAHAAANSVN-----GNGGWD----------GWAVYEPLAELRRLGVPNDMWRATKLNESYAICD 218
            |.:||..|:.     .|...|          ||.     .||.|.|...  ||.:.:|:.:.:..
Zfish   178 FQNAALGSIEMKQFLSNRRRDPSMNWLECSLGWE-----QELERTGASG--WRVSSVNDRFEMST 235

  Fly   219 SYPAVWAVPKAASDDFLRRVAQFRSRCRLPVLSWMNPRTQATITRCSQPLVGVSGKRNS-----D 278
            |.|....||:...|..|::.....:..|:|...|.:||        ...|:.::..:|:     |
Zfish   236 SLPRFNVVPQRVLDTELKKTFAHFNEGRIPRWCWRHPR--------GSDLLRMASFQNNIYHEKD 292

  Fly   279 DEAYLSFIMEANAQSDKLTIMDARPSANAIANKAKGGGYESEDAYKNVEINFLDIHNIHVMRESL 343
            |...|..::....|  ...|:|......:.|                      ||...|....:|
Zfish   293 DIRNLELVLFGGQQ--LCVIVDLGEEMPSPA----------------------DIQLAHTRLRTL 333

  Fly   344 RKVKEACFPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLT 408
            .....:...:..|.||.:.:::|.||.:.||.|..|..:...:.....:||:...:..|....:.
Zfish   334 CLGDISSSVSVPDDKWLSTLESTRWLDYTRCCLRKAAEVCCLLRAGHMTVVLQEPEDRDMNCVVC 398

  Fly   409 ALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQQ 473
            :|..::.|||.|||.||:.|::|||::.||||..||.:  ::.||.:.:||||.|:|.|||:..|
Zfish   399 SLVQVMCDPHCRTVAGFQGLVQKEWITAGHKFLSRINY--HRESDKEEAPVFLLFLDCVWQLWAQ 461

  Fly   474 FNNAFEFNEHFLITIVDHLYSCRFGTFLCNTEAERVAEDLKHKTTSLWTHINSSLD-------QY 531
            :...|:..|.:|:.:.|.::...|.:||.|::.||.... :|...| :|.:|...|       :.
Zfish   462 YPARFQLTEDYLLALHDSVHLPLFSSFLANSQRERCRRS-QHLPQS-YTPVNGLRDVPMSVPEEP 524

  Fly   532 LNPLFP 537
            ::|.||
Zfish   525 VDPPFP 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_001285651.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 26/109 (24%)
Myotub-related 184..509 CDD:399535 87/339 (26%)
mtmr11NP_001313370.1 PH-GRAM_MTMR11 41..162 CDD:275433 26/113 (23%)
PTPc 210..495 CDD:304379 84/325 (26%)
3-PAP 578..703 CDD:289355
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590813
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.