DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtm and mtmr2

DIOPT Version :10

Sequence 1:NP_523489.1 Gene:mtm / 33845 FlyBaseID:FBgn0025742 Length:619 Species:Drosophila melanogaster
Sequence 2:XP_002935623.3 Gene:mtmr2 / 100494494 XenbaseID:XB-GENE-6044385 Length:570 Species:Xenopus tropicalis


Alignment Length:569 Identity:329/569 - (57%)
Similarity:427/569 - (75%) Gaps:16/569 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LEGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVDVPLGVIARVEKIGG 114
            |.||..:|...||||:||:.|...|:.|:||||||||||. ||:.  :|:|.|||:|:|:|||||
 Frog     7 LPGESVKDIAKDVTYICPFSGAYRGSFTVTNYRLYFRSLE-RDRH--LVLDAPLGIISRIEKIGG 68

  Fly   115 ATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVFEKLQANAFPLSYSGRLFAFAHAAANSVNG 179
            |.|||||..||||.||||||:|||:||...:|::|||.|...||||:|...||||.:......| 
 Frog    69 AASRGENPNGIEIVCKDMRNIRFAYKQDLRTRKSVFENLVKFAFPLNYGLPLFAFEYKEVFPEN- 132

  Fly   180 NGGWDGWAVYEPLAELRRLGVPNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSR 244
                 ||.||:|:.|.||.|:||:.||.|::||.|.:||:|||...||...|||.||::|.||::
 Frog   133 -----GWKVYDPIQEYRRQGIPNESWRITRVNERYELCDTYPACLVVPANISDDELRKIAAFRAQ 192

  Fly   245 CRLPVLSWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMDARPSANAIA 309
            .|:|||||::|.:||.||||||||.||:|||:.:||.||..||:|||||.|:.|.|||||.||:|
 Frog   193 DRIPVLSWIHPESQAAITRCSQPLPGVNGKRSKEDEKYLQSIMDANAQSHKVFIFDARPSVNAVA 257

  Fly   310 NKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEACFPTTDDSKWQTAIDNTLWLKHIRC 374
            ||||||||||||||:|.|:.|||||||||||||.||:||..:|:..::.|.:.:::|.||:||:.
 Frog   258 NKAKGGGYESEDAYQNAELVFLDIHNIHVMRESQRKLKEISYPSIQEANWLSNLESTHWLEHIKL 322

  Fly   375 ILAGAVRIVDKVETMSTSVVVHCSDGWDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHK 439
            |||||:||.||||:..||||||||||||||.|||:|:|::||.:|||:||||||:||||:||||:
 Frog   323 ILAGALRIADKVESGKTSVVVHCSDGWDRTPQLTSLAMIMLDGYYRTIRGFEVLVEKEWVSFGHR 387

  Fly   440 FQQRIGHGDNKHSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTFLCNT 504
            |.||.||||..|:||||||:||||||.|||:::||.|||||||||||.|:||||||.|||||||.
 Frog   388 FYQRTGHGDKNHADADRSPMFLQFIDCVWQMTRQFPNAFEFNEHFLIIILDHLYSCLFGTFLCNC 452

  Fly   505 EAERVAEDLKHKTTSLWTHINSSLDQYLNPLFPSF-THGAELVLRPIASVRSVRLWKGLYCRWNP 568
            |.:::.|.:..::.|||:.|||.|:.::|||:.:: :|    ||.|:.|.|::.||.|.|.||||
 Frog   453 ELQKLKEGVVEESVSLWSFINSQLEDFINPLYVNYSSH----VLYPVTSTRNLELWAGYYIRWNP 513

  Fly   569 GLCAPQHGCQRTRELLSKQDQLFKLVNELRLKSNNRSNSMQTTTRLASP 617
            ....|.....|.:.||:|:.:|.|.:.||:.:.:|||.|  ::.|.:||
 Frog   514 RTRPPGAINSRYKVLLAKRAELQKRLEELQREISNRSTS--SSDRGSSP 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtmNP_523489.1 PH-GRAM_MTMR2_insect-like 57..159 CDD:270164 61/101 (60%)
Myotub-related 184..509 CDD:461958 215/324 (66%)
mtmr2XP_002935623.3 PH-like 1..115 CDD:473070 66/110 (60%)
Myotub-related 130..455 CDD:461958 216/330 (65%)

Return to query results.
Submit another query.