DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9109 and C1GalTA

DIOPT Version :9

Sequence 1:NP_001285650.1 Gene:CG9109 / 33844 FlyBaseID:FBgn0031765 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_609258.1 Gene:C1GalTA / 34215 FlyBaseID:FBgn0032078 Length:388 Species:Drosophila melanogaster


Alignment Length:265 Identity:61/265 - (23%)
Similarity:99/265 - (37%) Gaps:72/265 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 PEEPLTLGQRRNGCEH-----TTGSHIYFAIK------TCAKFHKERIPIIERTWAADARNRRYY 306
            ||:.:      .|.||     |....:|..::      |....|:::...::|||........:.
  Fly    75 PEQDV------GGHEHVHENSTIAERLYSEVRVLCWIMTNPSNHQKKARHVKRTWGKRCNKLIFM 133

  Fly   307 SDVADVGIPAIGTGIPNVQTGHCAKTMAILQLSLKDIGKQL------DIRWLMLVDDDTLLSLHL 365
            |...|..:.|:...:...:.....||        |:..|.:      |..|.:..||||.     
  Fly   134 SSAKDDELDAVALPVGEGRNNLWGKT--------KEAYKYIYEHHINDADWFLKADDDTY----- 185

  Fly   366 IHTHLPTSVPRVSALLCRHNATELVYLGQRYGYRLHAPDGFNYHTGGAGIVLSLPLVRLIV---- 426
                  |.|..:..:|..::....||.|.:  ::.:...|  |.:||||.|||...||..|    
  Fly   186 ------TIVENMRYMLYPYSPETPVYFGCK--FKPYVKQG--YMSGGAGYVLSREAVRRFVVEAL 240

  Fly   427 ---QRCSCPSASAPDDMILGYCLQALGVPAIHVAGMHQARPQDYAG---------ELLQLHAPLT 479
               :.|...::.| :|:.:|.|||.:.|    :||  .:|..:..|         .|:..|   |
  Fly   241 PNPKLCKSDNSGA-EDVEIGKCLQNVNV----LAG--DSRDSNGRGRFFPFVPEHHLIPSH---T 295

  Fly   480 FHKFW 484
            ..|||
  Fly   296 DKKFW 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9109NP_001285650.1 Fringe 269..486 CDD:190308 56/244 (23%)
C1GalTANP_609258.1 Galactosyl_T 119..>265 CDD:304462 41/169 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2246
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.