DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9109 and Lfng

DIOPT Version :10

Sequence 1:NP_001285650.1 Gene:CG9109 / 33844 FlyBaseID:FBgn0031765 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_596884.1 Gene:Lfng / 170905 RGDID:620587 Length:378 Species:Rattus norvegicus


Alignment Length:322 Identity:73/322 - (22%)
Similarity:117/322 - (36%) Gaps:97/322 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 SPDPHISTPISGGILLKSASYI-------------CSTPTSVPNRKLPCLLHAQPEEPLTLGQRR 263
            :|.|.....:..|:|::....:             ...|..|.:|:..             |..|
  Rat    52 APGPGSRAAVDPGVLVREVHSLSEYFSLLTRARRDADPPPGVASRQGD-------------GHPR 103

  Fly   264 NGCEHTTGSHIYFAIKTCAKFHKERIPIIERTWAADARNRRY-YSDVADVGIPAIGTGIPNVQTG 327
            ...|..:...::.|:||..|||:.|:.::..||.:..:...: ::|..|..: |..||  ||...
  Rat   104 PPAEVLSPRDVFIAVKTTRKFHRARLDLLFETWISRHKEMTFIFTDGEDEAL-AKHTG--NVVLT 165

  Fly   328 HCAKTMAILQLSLK---------DIGKQLDIRWLMLVDDDTLLSLHLIHTHLPTSVPRVSALLCR 383
            :|:...:...||.|         :.||    :|...||||..::|..:           ..||..
  Rat   166 NCSAAHSRQALSCKMAVEYDRFIESGK----KWFCHVDDDNYVNLRAL-----------LRLLAS 215

  Fly   384 HNATELVYLG-----------QRYGYRLHAPDGFNYHTGGAGIVLSLPLVRLIVQRCSCPSASA- 436
            :..|:.||:|           :|.......|..|.:.|||||..:|..|...:     .|.||. 
  Rat   216 YPHTQDVYIGKPSLDRPIQATERISEHRVRPVHFWFATGGAGFCISRGLALKM-----GPWASGG 275

  Fly   437 -----------PDDMILGYCLQA-LGVPAI-------HVAGMHQARPQDYAGELLQLHAPLT 479
                       |||..:||.::| ||||.|       |:..:.|.       ...:||..:|
  Rat   276 HFMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQV-------PTTELHEQVT 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9109NP_001285650.1 Fringe 269..486 CDD:367085 63/252 (25%)
LfngNP_596884.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..108 5/35 (14%)
Fringe 109..357 CDD:367085 63/252 (25%)

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