DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9107 and Rrp7a

DIOPT Version :9

Sequence 1:NP_608981.1 Gene:CG9107 / 33843 FlyBaseID:FBgn0031764 Length:266 Species:Drosophila melanogaster
Sequence 2:NP_001124040.1 Gene:Rrp7a / 362967 RGDID:1311547 Length:280 Species:Rattus norvegicus


Alignment Length:267 Identity:97/267 - (36%)
Similarity:150/267 - (56%) Gaps:14/267 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GYVVVPLRTTPKAQHCHSIYMREHFIRL-MDPNKPKGRTLFLLNVPPYVTEDSLRTVFGRAGSIE 69
            ||..||::.:.|.|..|.:|||:|.:|. .....|..||||:||||||.|::||.......|:|:
  Rat    22 GYSAVPVKFSEKQQASHYLYMRQHRVRQGTQSTWPANRTLFILNVPPYCTQESLSRCLSSCGTIK 86

  Fly    70 AVEFAAKPGKEETIKWYEGTGEP---FSNTRPPFVFKVAYIVFEKNSSIGKALALKSIDLFNSSG 131
            .||...||...|:.|      ||   |.:.:|...|:|||:||:|...:..||.||. .|..|:.
  Rat    87 TVELQEKPDLAESPK------EPKSQFFHPKPVPGFQVAYVVFQKPGGVSAALNLKG-PLLVSTE 144

  Fly   132 ECIVKTGMELWHEEYDCNYLLDAQKTKLQISKYMAGYDKR--ERAAAQAAKTGEADADGWVTVGK 194
            ...||.|:..|..:|: :.:||.:..:|::..:|..|||:  |.......:.|..|.:|||.|.:
  Rat   145 SHPVKNGIHKWISDYE-DSVLDPEALRLEVDTFMEAYDKKIAEEETKAKEEEGVPDEEGWVKVTR 208

  Fly   195 EGRNAGFEQKASVIGRLEEKVAKGNKTKELKNFYTFQIRESKMQNIVEMRKKFEEEKRKIGLLKQ 259
            .||.....:..:...|:.||..:....|||.:||.:|.||:||:::.::||||||:|::|.|::.
  Rat   209 RGRRPVLPRTEAASLRVLEKERRKRARKELLSFYAWQHRETKMEHLAQLRKKFEEDKQRIELMRA 273

  Fly   260 SRRFKPF 266
            .|:|:|:
  Rat   274 QRKFRPY 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9107NP_608981.1 RRM_Rrp7A 42..146 CDD:240740 42/106 (40%)
RRP7_Rrp7A 138..266 CDD:240578 43/129 (33%)
Rrp7aNP_001124040.1 RRM_Rrp7A 59..159 CDD:240740 42/106 (40%)
RRP7_Rrp7A 151..280 CDD:240578 43/129 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337331
Domainoid 1 1.000 84 1.000 Domainoid score I8111
eggNOG 1 0.900 - - E1_KOG4008
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41060
Inparanoid 1 1.050 165 1.000 Inparanoid score I4094
OMA 1 1.010 - - QHG59387
OrthoDB 1 1.010 - - D1607176at2759
OrthoFinder 1 1.000 - - FOG0004160
OrthoInspector 1 1.000 - - oto98256
orthoMCL 1 0.900 - - OOG6_103832
Panther 1 1.100 - - LDO PTHR13191
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5976
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.