DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and HB18

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_177248.3 Gene:HB18 / 843431 AraportID:AT1G70920 Length:206 Species:Arabidopsis thaliana


Alignment Length:146 Identity:40/146 - (27%)
Similarity:58/146 - (39%) Gaps:25/146 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 GGNGQGNASAGSNGKRKRSWSRAVFSNLQRKGLEIQFQQQKYITKPDRRKLAARLNLTDAQVKVW 342
            |.....|....::|.|:|...|  .:..|...||..|.|...:|...::.||..|.|:..||:||
plant    51 GATPHVNEDDSNSGGRRRKKLR--LTKEQSHLLEESFIQNHTLTPKQKKDLATFLKLSQRQVEVW 113

  Fly   343 FQNR--RMKWRHTR----------ENLKSGQEKQPSAVPESGGVFKTSTPSGDGTPQEALDYSSD 395
            ||||  |.|.:||.          .:||....:....|.|...:..:||.:....|:        
plant   114 FQNRRARSKLKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSSTSALTMCPR-------- 170

  Fly   396 SCSSVDLSEQADEDDN 411
             |..|  ::..|.|.|
plant   171 -CERV--TDAVDNDSN 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 21/54 (39%)
HB18NP_177248.3 HOX 66..122 CDD:197696 22/57 (39%)
HALZ 124..167 CDD:420073 8/42 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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