DRSC/TRiP Functional Genomics Resources

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Protein Alignment H2.0 and AtHB23

DIOPT Version :9

Sequence 1:NP_523488.2 Gene:H2.0 / 33841 FlyBaseID:FBgn0001170 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_564268.1 Gene:AtHB23 / 839587 AraportID:AT1G26960 Length:255 Species:Arabidopsis thaliana


Alignment Length:241 Identity:54/241 - (22%)
Similarity:85/241 - (35%) Gaps:68/241 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 NALLRFHQHQKQQHQQHHHHQHHPKHLHQQHKPPPHNSTTASALLAPLHSLTSLQLTQQQQRFLG 247
            |.|..|.::...|    :|||....|                    |       ||.|....|||
plant     6 NGLAFFPENFSLQ----NHHQEEEDH--------------------P-------QLLQDFHGFLG 39

  Fly   248 KTPQQLLDIAPTSPAAAAAATSQNGAHGHGGGNGQGNASAGSN-GKRKRSWSRAVFSNLQRKGLE 311
            |.       :|.:..........||...:        :..||. |::||..:..     |.|.||
plant    40 KR-------SPMNNVQGFCNLDMNGDEEY--------SDDGSKMGEKKRRLNME-----QLKALE 84

  Fly   312 IQFQQQKYITKPDRRKLAARLNLTDAQVKVWFQNRRMKWRHTRENLKSGQ--EKQPSAVPESGGV 374
            ..|:....:....:.:||..|.|...|:.:||||||.:.: |::..|...  ::|..::.:...|
plant    85 KDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSK-TKQLEKDYDMLKRQFESLRDENEV 148

  Fly   375 FKTSTPS--------GDGTPQEALDYSSD---SCSSVDLSEQADED 409
            .:|....        ....|.|:::.:.:   |||  |.||....|
plant   149 LQTQNQKLQAQVMALKSREPIESINLNKETEGSCS--DRSENISGD 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H2.0NP_523488.2 Homeobox 298..351 CDD:278475 16/52 (31%)
AtHB23NP_564268.1 HOX 71..124 CDD:197696 18/57 (32%)
HALZ 126..168 CDD:396657 4/41 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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